Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MIR7108-201ENST00000614319 87 ntBASIC29.74■■■□□ 2.35
PCDHB7Q9Y5E2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
PCDHB7Q9Y5E2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHB7Q9Y5E2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHB7Q9Y5E2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHB7Q9Y5E2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHB7Q9Y5E2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHB7Q9Y5E2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHB7Q9Y5E2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCDHB7Q9Y5E2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.63■■■□□ 2.33
PCDHB7Q9Y5E2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.62■■■□□ 2.33
PCDHB7Q9Y5E2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHB7Q9Y5E2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.62■■■□□ 2.33
PCDHB7Q9Y5E2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHB7Q9Y5E2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHB7Q9Y5E2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.61■■■□□ 2.33
PCDHB7Q9Y5E2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHB7Q9Y5E2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDHB7Q9Y5E2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
PCDHB7Q9Y5E2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
PCDHB7Q9Y5E2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDHB7Q9Y5E2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHB7Q9Y5E2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.57■■■□□ 2.32
PCDHB7Q9Y5E2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHB7Q9Y5E2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.56■■■□□ 2.32
PCDHB7Q9Y5E2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHB7Q9Y5E2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.55■■■□□ 2.32
PCDHB7Q9Y5E2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.55■■■□□ 2.32
PCDHB7Q9Y5E2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHB7Q9Y5E2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
PCDHB7Q9Y5E2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHB7Q9Y5E2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.54■■■□□ 2.32
PCDHB7Q9Y5E2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHB7Q9Y5E2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHB7Q9Y5E2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHB7Q9Y5E2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.52■■■□□ 2.32
PCDHB7Q9Y5E2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.51■■■□□ 2.31
PCDHB7Q9Y5E2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHB7Q9Y5E2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHB7Q9Y5E2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHB7Q9Y5E2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHB7Q9Y5E2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHB7Q9Y5E2 ZNRF2P2-203ENST00000454624 420 ntBASIC29.47■■■□□ 2.31
PCDHB7Q9Y5E2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHB7Q9Y5E2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHB7Q9Y5E2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHB7Q9Y5E2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHB7Q9Y5E2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDHB7Q9Y5E2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHB7Q9Y5E2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHB7Q9Y5E2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHB7Q9Y5E2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHB7Q9Y5E2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHB7Q9Y5E2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHB7Q9Y5E2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.4■■■□□ 2.3
PCDHB7Q9Y5E2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
PCDHB7Q9Y5E2 HLA-V-202ENST00000446817 847 ntBASIC29.4■■■□□ 2.3
PCDHB7Q9Y5E2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.4■■■□□ 2.3
PCDHB7Q9Y5E2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.4■■■□□ 2.3
PCDHB7Q9Y5E2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHB7Q9Y5E2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.39■■■□□ 2.3
PCDHB7Q9Y5E2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDHB7Q9Y5E2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.38■■■□□ 2.29
PCDHB7Q9Y5E2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PCDHB7Q9Y5E2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.37■■■□□ 2.29
PCDHB7Q9Y5E2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.36■■■□□ 2.29
PCDHB7Q9Y5E2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.35■■■□□ 2.29
PCDHB7Q9Y5E2 DUX4L29-201ENST00000425409 679 ntBASIC29.35■■■□□ 2.29
PCDHB7Q9Y5E2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHB7Q9Y5E2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.34■■■□□ 2.29
PCDHB7Q9Y5E2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHB7Q9Y5E2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
PCDHB7Q9Y5E2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHB7Q9Y5E2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHB7Q9Y5E2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHB7Q9Y5E2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.31■■■□□ 2.28
PCDHB7Q9Y5E2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.3■■■□□ 2.28
PCDHB7Q9Y5E2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
PCDHB7Q9Y5E2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHB7Q9Y5E2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.28■■■□□ 2.28
PCDHB7Q9Y5E2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHB7Q9Y5E2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.27■■■□□ 2.28
PCDHB7Q9Y5E2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
PCDHB7Q9Y5E2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHB7Q9Y5E2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.26■■■□□ 2.27
PCDHB7Q9Y5E2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.26■■■□□ 2.27
PCDHB7Q9Y5E2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.26■■■□□ 2.27
PCDHB7Q9Y5E2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHB7Q9Y5E2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.24■■■□□ 2.27
PCDHB7Q9Y5E2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHB7Q9Y5E2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHB7Q9Y5E2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHB7Q9Y5E2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.23■■■□□ 2.27
PCDHB7Q9Y5E2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHB7Q9Y5E2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.22■■■□□ 2.27
PCDHB7Q9Y5E2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHB7Q9Y5E2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHB7Q9Y5E2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
PCDHB7Q9Y5E2 AC021231.2-201ENST00000594613 730 ntBASIC29.22■■■□□ 2.27
PCDHB7Q9Y5E2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms