Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSDC2Q9Y534 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSDC2Q9Y534 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSDC2Q9Y534 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSDC2Q9Y534 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSDC2Q9Y534 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSDC2Q9Y534 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.71■□□□□ 0.58
CSDC2Q9Y534 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSDC2Q9Y534 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSDC2Q9Y534 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSDC2Q9Y534 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSDC2Q9Y534 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSDC2Q9Y534 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSDC2Q9Y534 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.65■□□□□ 0.58
CSDC2Q9Y534 ZNRF2P1-201ENST00000441407 443 ntBASIC18.64■□□□□ 0.57
CSDC2Q9Y534 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSDC2Q9Y534 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.63■□□□□ 0.57
CSDC2Q9Y534 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSDC2Q9Y534 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.62■□□□□ 0.57
CSDC2Q9Y534 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSDC2Q9Y534 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSDC2Q9Y534 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 ST7-AS1-201ENST00000456775 1889 ntBASIC18.6■□□□□ 0.57
CSDC2Q9Y534 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSDC2Q9Y534 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSDC2Q9Y534 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.58■□□□□ 0.56
CSDC2Q9Y534 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSDC2Q9Y534 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSDC2Q9Y534 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSDC2Q9Y534 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSDC2Q9Y534 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSDC2Q9Y534 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSDC2Q9Y534 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSDC2Q9Y534 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSDC2Q9Y534 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CSDC2Q9Y534 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSDC2Q9Y534 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSDC2Q9Y534 DYNLL1-208ENST00000550178 581 ntBASIC18.48■□□□□ 0.55
CSDC2Q9Y534 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSDC2Q9Y534 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CSDC2Q9Y534 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSDC2Q9Y534 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CSDC2Q9Y534 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSDC2Q9Y534 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CSDC2Q9Y534 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CSDC2Q9Y534 AL135925.1-201ENST00000605920 1701 ntBASIC18.43■□□□□ 0.54
CSDC2Q9Y534 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CSDC2Q9Y534 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSDC2Q9Y534 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSDC2Q9Y534 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms