Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC005559.1-201ENST00000589661 871 ntBASIC30.92■■■□□ 2.54
PDLIM7Q9NR12 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDLIM7Q9NR12 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDLIM7Q9NR12 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PDLIM7Q9NR12 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PDLIM7Q9NR12 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDLIM7Q9NR12 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.86■■■□□ 2.53
PDLIM7Q9NR12 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDLIM7Q9NR12 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDLIM7Q9NR12 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDLIM7Q9NR12 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.84■■■□□ 2.53
PDLIM7Q9NR12 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PDLIM7Q9NR12 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.83■■■□□ 2.53
PDLIM7Q9NR12 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.83■■■□□ 2.53
PDLIM7Q9NR12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.82■■■□□ 2.52
PDLIM7Q9NR12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.82■■■□□ 2.52
PDLIM7Q9NR12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.82■■■□□ 2.52
PDLIM7Q9NR12 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PDLIM7Q9NR12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.81■■■□□ 2.52
PDLIM7Q9NR12 ZNRF2P2-203ENST00000454624 420 ntBASIC30.81■■■□□ 2.52
PDLIM7Q9NR12 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.81■■■□□ 2.52
PDLIM7Q9NR12 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDLIM7Q9NR12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDLIM7Q9NR12 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
PDLIM7Q9NR12 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.77■■■□□ 2.52
PDLIM7Q9NR12 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.77■■■□□ 2.52
PDLIM7Q9NR12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PDLIM7Q9NR12 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDLIM7Q9NR12 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PDLIM7Q9NR12 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.73■■■□□ 2.51
PDLIM7Q9NR12 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDLIM7Q9NR12 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PDLIM7Q9NR12 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDLIM7Q9NR12 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.7■■■□□ 2.5
PDLIM7Q9NR12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDLIM7Q9NR12 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDLIM7Q9NR12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
PDLIM7Q9NR12 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.67■■■□□ 2.5
PDLIM7Q9NR12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PDLIM7Q9NR12 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
PDLIM7Q9NR12 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDLIM7Q9NR12 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PDLIM7Q9NR12 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDLIM7Q9NR12 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PDLIM7Q9NR12 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.64■■■□□ 2.5
PDLIM7Q9NR12 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PDLIM7Q9NR12 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDLIM7Q9NR12 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.61■■■□□ 2.49
PDLIM7Q9NR12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.61■■■□□ 2.49
PDLIM7Q9NR12 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PDLIM7Q9NR12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
PDLIM7Q9NR12 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.6■■■□□ 2.49
PDLIM7Q9NR12 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.6■■■□□ 2.49
PDLIM7Q9NR12 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDLIM7Q9NR12 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDLIM7Q9NR12 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDLIM7Q9NR12 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PDLIM7Q9NR12 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.58■■■□□ 2.49
PDLIM7Q9NR12 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.56■■■□□ 2.48
PDLIM7Q9NR12 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDLIM7Q9NR12 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
PDLIM7Q9NR12 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.55■■■□□ 2.48
PDLIM7Q9NR12 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDLIM7Q9NR12 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.54■■■□□ 2.48
PDLIM7Q9NR12 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PDLIM7Q9NR12 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDLIM7Q9NR12 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
PDLIM7Q9NR12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.52■■■□□ 2.48
PDLIM7Q9NR12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDLIM7Q9NR12 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDLIM7Q9NR12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.5■■■□□ 2.47
PDLIM7Q9NR12 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDLIM7Q9NR12 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.49■■■□□ 2.47
PDLIM7Q9NR12 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.49■■■□□ 2.47
PDLIM7Q9NR12 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PDLIM7Q9NR12 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
PDLIM7Q9NR12 MIR4449-201ENST00000578365 66 ntBASIC30.48■■■□□ 2.47
PDLIM7Q9NR12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
PDLIM7Q9NR12 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.47■■■□□ 2.47
PDLIM7Q9NR12 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PDLIM7Q9NR12 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PDLIM7Q9NR12 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PDLIM7Q9NR12 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PDLIM7Q9NR12 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDLIM7Q9NR12 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDLIM7Q9NR12 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDLIM7Q9NR12 DUX4L29-201ENST00000425409 679 ntBASIC30.41■■■□□ 2.46
PDLIM7Q9NR12 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PDLIM7Q9NR12 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.4■■■□□ 2.46
PDLIM7Q9NR12 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PDLIM7Q9NR12 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
PDLIM7Q9NR12 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.38■■■□□ 2.45
PDLIM7Q9NR12 WASH5P-204ENST00000632292 975 ntBASIC30.38■■■□□ 2.45
PDLIM7Q9NR12 MIR639-201ENST00000384974 98 ntBASIC30.37■■■□□ 2.45
PDLIM7Q9NR12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDLIM7Q9NR12 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PDLIM7Q9NR12 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDLIM7Q9NR12 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.33■■■□□ 2.45
PDLIM7Q9NR12 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PDLIM7Q9NR12 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms