Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.32■■■□□ 2.12
DDX47Q9H0S4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
DDX47Q9H0S4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX47Q9H0S4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX47Q9H0S4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.3■■■□□ 2.12
DDX47Q9H0S4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX47Q9H0S4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX47Q9H0S4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX47Q9H0S4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX47Q9H0S4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
DDX47Q9H0S4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
DDX47Q9H0S4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX47Q9H0S4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX47Q9H0S4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX47Q9H0S4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX47Q9H0S4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.24■■■□□ 2.11
DDX47Q9H0S4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.24■■■□□ 2.11
DDX47Q9H0S4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX47Q9H0S4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX47Q9H0S4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DDX47Q9H0S4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX47Q9H0S4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DDX47Q9H0S4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
DDX47Q9H0S4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.2■■■□□ 2.1
DDX47Q9H0S4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
DDX47Q9H0S4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
DDX47Q9H0S4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX47Q9H0S4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX47Q9H0S4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.18■■■□□ 2.1
DDX47Q9H0S4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
DDX47Q9H0S4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX47Q9H0S4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.16■■■□□ 2.1
DDX47Q9H0S4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX47Q9H0S4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
DDX47Q9H0S4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX47Q9H0S4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
DDX47Q9H0S4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.13■■■□□ 2.09
DDX47Q9H0S4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
DDX47Q9H0S4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
DDX47Q9H0S4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX47Q9H0S4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX47Q9H0S4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.11■■■□□ 2.09
DDX47Q9H0S4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.11■■■□□ 2.09
DDX47Q9H0S4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX47Q9H0S4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX47Q9H0S4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX47Q9H0S4 ZNRF2P1-201ENST00000441407 443 ntBASIC28.09■■■□□ 2.09
DDX47Q9H0S4 ST7-AS1-201ENST00000456775 1889 ntBASIC28.08■■■□□ 2.09
DDX47Q9H0S4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
DDX47Q9H0S4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX47Q9H0S4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DDX47Q9H0S4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DDX47Q9H0S4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.07■■■□□ 2.08
DDX47Q9H0S4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX47Q9H0S4 AL161658.1-201ENST00000623641 1967 ntBASIC28.06■■■□□ 2.08
DDX47Q9H0S4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
DDX47Q9H0S4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX47Q9H0S4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX47Q9H0S4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
DDX47Q9H0S4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.03■■■□□ 2.08
DDX47Q9H0S4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DDX47Q9H0S4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28■■■□□ 2.07
DDX47Q9H0S4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX47Q9H0S4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX47Q9H0S4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
DDX47Q9H0S4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX47Q9H0S4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX47Q9H0S4 DYNLL1-208ENST00000550178 581 ntBASIC27.97■■■□□ 2.07
DDX47Q9H0S4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
DDX47Q9H0S4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
DDX47Q9H0S4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
DDX47Q9H0S4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
DDX47Q9H0S4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
DDX47Q9H0S4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.92■■■□□ 2.06
DDX47Q9H0S4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX47Q9H0S4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
DDX47Q9H0S4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
DDX47Q9H0S4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.89■■■□□ 2.05
DDX47Q9H0S4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
DDX47Q9H0S4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.88■■■□□ 2.05
DDX47Q9H0S4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
DDX47Q9H0S4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
DDX47Q9H0S4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
DDX47Q9H0S4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
DDX47Q9H0S4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
DDX47Q9H0S4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
DDX47Q9H0S4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
DDX47Q9H0S4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
DDX47Q9H0S4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.04
DDX47Q9H0S4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
DDX47Q9H0S4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
DDX47Q9H0S4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
DDX47Q9H0S4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
DDX47Q9H0S4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms