Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 WASH5P-204ENST00000632292 975 ntBASIC28.13■■■□□ 2.09
PRICKLE1Q96MT3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.12■■■□□ 2.09
PRICKLE1Q96MT3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PRICKLE1Q96MT3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
PRICKLE1Q96MT3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
PRICKLE1Q96MT3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PRICKLE1Q96MT3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PRICKLE1Q96MT3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PRICKLE1Q96MT3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
PRICKLE1Q96MT3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PRICKLE1Q96MT3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PRICKLE1Q96MT3 AC120057.4-201ENST00000624722 1615 ntBASIC28.07■■■□□ 2.08
PRICKLE1Q96MT3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PRICKLE1Q96MT3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PRICKLE1Q96MT3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PRICKLE1Q96MT3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.06■■■□□ 2.08
PRICKLE1Q96MT3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PRICKLE1Q96MT3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
PRICKLE1Q96MT3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PRICKLE1Q96MT3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.02■■■□□ 2.08
PRICKLE1Q96MT3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PRICKLE1Q96MT3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.01■■■□□ 2.07
PRICKLE1Q96MT3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28■■■□□ 2.07
PRICKLE1Q96MT3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28■■■□□ 2.07
PRICKLE1Q96MT3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PRICKLE1Q96MT3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PRICKLE1Q96MT3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PRICKLE1Q96MT3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.98■■■□□ 2.07
PRICKLE1Q96MT3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
PRICKLE1Q96MT3 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.96■■■□□ 2.07
PRICKLE1Q96MT3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
PRICKLE1Q96MT3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PRICKLE1Q96MT3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PRICKLE1Q96MT3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
PRICKLE1Q96MT3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PRICKLE1Q96MT3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.93■■■□□ 2.06
PRICKLE1Q96MT3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.93■■■□□ 2.06
PRICKLE1Q96MT3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PRICKLE1Q96MT3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.92■■■□□ 2.06
PRICKLE1Q96MT3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.92■■■□□ 2.06
PRICKLE1Q96MT3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
PRICKLE1Q96MT3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.91■■■□□ 2.06
PRICKLE1Q96MT3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PRICKLE1Q96MT3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PRICKLE1Q96MT3 AL162393.1-201ENST00000437852 946 ntBASIC27.9■■■□□ 2.06
PRICKLE1Q96MT3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.9■■■□□ 2.06
PRICKLE1Q96MT3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PRICKLE1Q96MT3 MIR762-201ENST00000390236 83 ntBASIC27.88■■■□□ 2.05
PRICKLE1Q96MT3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 RPS2P35-201ENST00000443417 897 ntBASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 AP006261.1-201ENST00000584783 668 ntBASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PRICKLE1Q96MT3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PRICKLE1Q96MT3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PRICKLE1Q96MT3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PRICKLE1Q96MT3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PRICKLE1Q96MT3 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.83■■■□□ 2.05
PRICKLE1Q96MT3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PRICKLE1Q96MT3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.81■■■□□ 2.04
PRICKLE1Q96MT3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.8■■■□□ 2.04
PRICKLE1Q96MT3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PRICKLE1Q96MT3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PRICKLE1Q96MT3 DUX4L28-201ENST00000623687 678 ntBASIC27.78■■■□□ 2.04
PRICKLE1Q96MT3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.77■■■□□ 2.04
PRICKLE1Q96MT3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.04
PRICKLE1Q96MT3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
PRICKLE1Q96MT3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PRICKLE1Q96MT3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PRICKLE1Q96MT3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
PRICKLE1Q96MT3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PRICKLE1Q96MT3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PRICKLE1Q96MT3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PRICKLE1Q96MT3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
PRICKLE1Q96MT3 AC005559.1-201ENST00000589661 871 ntBASIC27.74■■■□□ 2.03
PRICKLE1Q96MT3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PRICKLE1Q96MT3 MIR3665-201ENST00000578708 105 ntBASIC27.73■■■□□ 2.03
PRICKLE1Q96MT3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PRICKLE1Q96MT3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.72■■■□□ 2.03
PRICKLE1Q96MT3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
PRICKLE1Q96MT3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PRICKLE1Q96MT3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PRICKLE1Q96MT3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
PRICKLE1Q96MT3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.68■■■□□ 2.02
PRICKLE1Q96MT3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
PRICKLE1Q96MT3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PRICKLE1Q96MT3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PRICKLE1Q96MT3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PRICKLE1Q96MT3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PRICKLE1Q96MT3 AC087741.3-201ENST00000624270 1347 ntBASIC27.66■■■□□ 2.02
PRICKLE1Q96MT3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PRICKLE1Q96MT3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PRICKLE1Q96MT3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
PRICKLE1Q96MT3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms