Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATP6V0A1Q93050 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.64■■■□□ 2.5
ATP6V0A1Q93050 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.63■■■□□ 2.49
ATP6V0A1Q93050 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.63■■■□□ 2.49
ATP6V0A1Q93050 MIR3665-201ENST00000578708 105 ntBASIC30.63■■■□□ 2.49
ATP6V0A1Q93050 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ATP6V0A1Q93050 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ATP6V0A1Q93050 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP6V0A1Q93050 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
ATP6V0A1Q93050 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
ATP6V0A1Q93050 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATP6V0A1Q93050 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ATP6V0A1Q93050 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.57■■■□□ 2.48
ATP6V0A1Q93050 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ATP6V0A1Q93050 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ATP6V0A1Q93050 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.56■■■□□ 2.48
ATP6V0A1Q93050 MIR762-201ENST00000390236 83 ntBASIC30.55■■■□□ 2.48
ATP6V0A1Q93050 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ATP6V0A1Q93050 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ATP6V0A1Q93050 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ATP6V0A1Q93050 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.54■■■□□ 2.48
ATP6V0A1Q93050 WASH5P-204ENST00000632292 975 ntBASIC30.54■■■□□ 2.48
ATP6V0A1Q93050 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.54■■■□□ 2.48
ATP6V0A1Q93050 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.53■■■□□ 2.48
ATP6V0A1Q93050 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ATP6V0A1Q93050 DUX4L28-201ENST00000623687 678 ntBASIC30.52■■■□□ 2.48
ATP6V0A1Q93050 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.51■■■□□ 2.47
ATP6V0A1Q93050 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ATP6V0A1Q93050 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ATP6V0A1Q93050 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
ATP6V0A1Q93050 AC087741.3-201ENST00000624270 1347 ntBASIC30.49■■■□□ 2.47
ATP6V0A1Q93050 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ATP6V0A1Q93050 AC005559.1-201ENST00000589661 871 ntBASIC30.47■■■□□ 2.47
ATP6V0A1Q93050 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ATP6V0A1Q93050 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.44■■■□□ 2.46
ATP6V0A1Q93050 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ATP6V0A1Q93050 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ATP6V0A1Q93050 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.43■■■□□ 2.46
ATP6V0A1Q93050 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ATP6V0A1Q93050 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.41■■■□□ 2.46
ATP6V0A1Q93050 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ATP6V0A1Q93050 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
ATP6V0A1Q93050 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ATP6V0A1Q93050 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
ATP6V0A1Q93050 AC120057.4-201ENST00000624722 1615 ntBASIC30.39■■■□□ 2.46
ATP6V0A1Q93050 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.38■■■□□ 2.45
ATP6V0A1Q93050 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
ATP6V0A1Q93050 AC044849.2-201ENST00000606596 710 ntBASIC30.37■■■□□ 2.45
ATP6V0A1Q93050 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ATP6V0A1Q93050 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.36■■■□□ 2.45
ATP6V0A1Q93050 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATP6V0A1Q93050 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
ATP6V0A1Q93050 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
ATP6V0A1Q93050 ABHD17AP4-201ENST00000411545 909 ntBASIC30.33■■■□□ 2.45
ATP6V0A1Q93050 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.33■■■□□ 2.45
ATP6V0A1Q93050 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATP6V0A1Q93050 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.29■■■□□ 2.44
ATP6V0A1Q93050 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP6V0A1Q93050 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ATP6V0A1Q93050 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.27■■■□□ 2.44
ATP6V0A1Q93050 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V0A1Q93050 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V0A1Q93050 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.26■■■□□ 2.43
ATP6V0A1Q93050 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATP6V0A1Q93050 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V0A1Q93050 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V0A1Q93050 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATP6V0A1Q93050 MIR7108-201ENST00000614319 87 ntBASIC30.24■■■□□ 2.43
ATP6V0A1Q93050 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
ATP6V0A1Q93050 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATP6V0A1Q93050 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.21■■■□□ 2.43
ATP6V0A1Q93050 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V0A1Q93050 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATP6V0A1Q93050 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATP6V0A1Q93050 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
ATP6V0A1Q93050 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.18■■■□□ 2.42
ATP6V0A1Q93050 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATP6V0A1Q93050 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATP6V0A1Q93050 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ATP6V0A1Q93050 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ATP6V0A1Q93050 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ATP6V0A1Q93050 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.15■■■□□ 2.42
ATP6V0A1Q93050 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ATP6V0A1Q93050 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
ATP6V0A1Q93050 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
ATP6V0A1Q93050 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ATP6V0A1Q93050 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.13■■■□□ 2.41
ATP6V0A1Q93050 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ATP6V0A1Q93050 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ATP6V0A1Q93050 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.12■■■□□ 2.41
ATP6V0A1Q93050 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ATP6V0A1Q93050 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ATP6V0A1Q93050 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ATP6V0A1Q93050 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.11■■■□□ 2.41
ATP6V0A1Q93050 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ATP6V0A1Q93050 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ATP6V0A1Q93050 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ATP6V0A1Q93050 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ATP6V0A1Q93050 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ATP6V0A1Q93050 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms