Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.55■■■□□ 2.64
SH3TC2Q8TF17 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SH3TC2Q8TF17 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.51■■■□□ 2.63
SH3TC2Q8TF17 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.49■■■□□ 2.63
SH3TC2Q8TF17 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SH3TC2Q8TF17 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.48■■■□□ 2.63
SH3TC2Q8TF17 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
SH3TC2Q8TF17 MIR639-201ENST00000384974 98 ntBASIC31.46■■■□□ 2.63
SH3TC2Q8TF17 DUX4L29-201ENST00000425409 679 ntBASIC31.45■■■□□ 2.63
SH3TC2Q8TF17 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.44■■■□□ 2.62
SH3TC2Q8TF17 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.43■■■□□ 2.62
SH3TC2Q8TF17 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SH3TC2Q8TF17 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SH3TC2Q8TF17 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SH3TC2Q8TF17 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.4■■■□□ 2.62
SH3TC2Q8TF17 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SH3TC2Q8TF17 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SH3TC2Q8TF17 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SH3TC2Q8TF17 HSD17B1P1-201ENST00000590052 955 ntBASIC31.36■■■□□ 2.61
SH3TC2Q8TF17 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SH3TC2Q8TF17 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.33■■■□□ 2.61
SH3TC2Q8TF17 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH3TC2Q8TF17 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.31■■■□□ 2.6
SH3TC2Q8TF17 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.3■■■□□ 2.6
SH3TC2Q8TF17 AC021231.2-201ENST00000594613 730 ntBASIC31.3■■■□□ 2.6
SH3TC2Q8TF17 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.29■■■□□ 2.6
SH3TC2Q8TF17 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.28■■■□□ 2.6
SH3TC2Q8TF17 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3TC2Q8TF17 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.27■■■□□ 2.6
SH3TC2Q8TF17 AC016575.1-201ENST00000607026 382 ntBASIC31.26■■■□□ 2.59
SH3TC2Q8TF17 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.23■■■□□ 2.59
SH3TC2Q8TF17 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MIR3648-2-201ENST00000581792 180 ntBASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MIR3648-1-201ENST00000615959 180 ntBASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 WASH5P-204ENST00000632292 975 ntBASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SH3TC2Q8TF17 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.18■■■□□ 2.58
SH3TC2Q8TF17 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SH3TC2Q8TF17 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.15■■■□□ 2.58
SH3TC2Q8TF17 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.14■■■□□ 2.58
SH3TC2Q8TF17 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SH3TC2Q8TF17 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SH3TC2Q8TF17 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SH3TC2Q8TF17 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SH3TC2Q8TF17 CR559946.2-201ENST00000623684 991 ntBASIC31.05■■■□□ 2.56
SH3TC2Q8TF17 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.03■■■□□ 2.56
SH3TC2Q8TF17 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
SH3TC2Q8TF17 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SH3TC2Q8TF17 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L11-201ENST00000611504 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L12-201ENST00000614593 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L14-201ENST00000621227 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 MIR6090-201ENST00000622481 60 ntBASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.94■■■□□ 2.54
SH3TC2Q8TF17 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH3TC2Q8TF17 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
SH3TC2Q8TF17 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 LINC01971-201ENST00000617888 1048 ntBASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
SH3TC2Q8TF17 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms