Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.55■■■□□ 2.64
SH3TC2Q8TF17 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SH3TC2Q8TF17 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.51■■■□□ 2.63
SH3TC2Q8TF17 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SH3TC2Q8TF17 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.49■■■□□ 2.63
SH3TC2Q8TF17 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SH3TC2Q8TF17 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.48■■■□□ 2.63
SH3TC2Q8TF17 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
SH3TC2Q8TF17 MIR639-201ENST00000384974 98 ntBASIC31.46■■■□□ 2.63
SH3TC2Q8TF17 DUX4L29-201ENST00000425409 679 ntBASIC31.45■■■□□ 2.63
SH3TC2Q8TF17 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.44■■■□□ 2.62
SH3TC2Q8TF17 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.43■■■□□ 2.62
SH3TC2Q8TF17 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SH3TC2Q8TF17 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SH3TC2Q8TF17 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SH3TC2Q8TF17 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.4■■■□□ 2.62
SH3TC2Q8TF17 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SH3TC2Q8TF17 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3TC2Q8TF17 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SH3TC2Q8TF17 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SH3TC2Q8TF17 HSD17B1P1-201ENST00000590052 955 ntBASIC31.36■■■□□ 2.61
SH3TC2Q8TF17 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH3TC2Q8TF17 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SH3TC2Q8TF17 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.33■■■□□ 2.61
SH3TC2Q8TF17 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH3TC2Q8TF17 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.31■■■□□ 2.6
SH3TC2Q8TF17 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.3■■■□□ 2.6
SH3TC2Q8TF17 AC021231.2-201ENST00000594613 730 ntBASIC31.3■■■□□ 2.6
SH3TC2Q8TF17 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.29■■■□□ 2.6
SH3TC2Q8TF17 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.28■■■□□ 2.6
SH3TC2Q8TF17 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH3TC2Q8TF17 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.27■■■□□ 2.6
SH3TC2Q8TF17 AC016575.1-201ENST00000607026 382 ntBASIC31.26■■■□□ 2.59
SH3TC2Q8TF17 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SH3TC2Q8TF17 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.23■■■□□ 2.59
SH3TC2Q8TF17 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MIR3648-2-201ENST00000581792 180 ntBASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 MIR3648-1-201ENST00000615959 180 ntBASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SH3TC2Q8TF17 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 WASH5P-204ENST00000632292 975 ntBASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SH3TC2Q8TF17 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SH3TC2Q8TF17 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.18■■■□□ 2.58
SH3TC2Q8TF17 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SH3TC2Q8TF17 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3TC2Q8TF17 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.15■■■□□ 2.58
SH3TC2Q8TF17 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.14■■■□□ 2.58
SH3TC2Q8TF17 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SH3TC2Q8TF17 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SH3TC2Q8TF17 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH3TC2Q8TF17 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3TC2Q8TF17 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SH3TC2Q8TF17 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SH3TC2Q8TF17 CR559946.2-201ENST00000623684 991 ntBASIC31.05■■■□□ 2.56
SH3TC2Q8TF17 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.03■■■□□ 2.56
SH3TC2Q8TF17 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
SH3TC2Q8TF17 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SH3TC2Q8TF17 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L11-201ENST00000611504 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L12-201ENST00000614593 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 DUX4L14-201ENST00000621227 1267 ntBASIC31■■■□□ 2.55
SH3TC2Q8TF17 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 MIR6090-201ENST00000622481 60 ntBASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SH3TC2Q8TF17 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.95■■■□□ 2.55
SH3TC2Q8TF17 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.94■■■□□ 2.54
SH3TC2Q8TF17 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH3TC2Q8TF17 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
SH3TC2Q8TF17 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3TC2Q8TF17 LINC01971-201ENST00000617888 1048 ntBASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
SH3TC2Q8TF17 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
SH3TC2Q8TF17 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms