Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR4449-201ENST00000578365 66 ntBASIC26.1■■□□□ 1.77
SNIP1Q8TAD8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNIP1Q8TAD8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.06■■□□□ 1.76
SNIP1Q8TAD8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNIP1Q8TAD8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.06■■□□□ 1.76
SNIP1Q8TAD8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNIP1Q8TAD8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.06■■□□□ 1.76
SNIP1Q8TAD8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNIP1Q8TAD8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SNIP1Q8TAD8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNIP1Q8TAD8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SNIP1Q8TAD8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.01■■□□□ 1.75
SNIP1Q8TAD8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNIP1Q8TAD8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNIP1Q8TAD8 MIR639-201ENST00000384974 98 ntBASIC26■■□□□ 1.75
SNIP1Q8TAD8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.99■■□□□ 1.75
SNIP1Q8TAD8 DUX4L29-201ENST00000425409 679 ntBASIC25.99■■□□□ 1.75
SNIP1Q8TAD8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.98■■□□□ 1.75
SNIP1Q8TAD8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.98■■□□□ 1.75
SNIP1Q8TAD8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNIP1Q8TAD8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNIP1Q8TAD8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.97■■□□□ 1.75
SNIP1Q8TAD8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.96■■□□□ 1.75
SNIP1Q8TAD8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNIP1Q8TAD8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNIP1Q8TAD8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNIP1Q8TAD8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNIP1Q8TAD8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNIP1Q8TAD8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.9■■□□□ 1.74
SNIP1Q8TAD8 WASH5P-204ENST00000632292 975 ntBASIC25.89■■□□□ 1.74
SNIP1Q8TAD8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SNIP1Q8TAD8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SNIP1Q8TAD8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.87■■□□□ 1.73
SNIP1Q8TAD8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.87■■□□□ 1.73
SNIP1Q8TAD8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNIP1Q8TAD8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.86■■□□□ 1.73
SNIP1Q8TAD8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.85■■□□□ 1.73
SNIP1Q8TAD8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNIP1Q8TAD8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.85■■□□□ 1.73
SNIP1Q8TAD8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNIP1Q8TAD8 HSD17B1P1-201ENST00000590052 955 ntBASIC25.84■■□□□ 1.73
SNIP1Q8TAD8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNIP1Q8TAD8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNIP1Q8TAD8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.83■■□□□ 1.73
SNIP1Q8TAD8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.83■■□□□ 1.73
SNIP1Q8TAD8 AC021231.2-201ENST00000594613 730 ntBASIC25.83■■□□□ 1.73
SNIP1Q8TAD8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.82■■□□□ 1.72
SNIP1Q8TAD8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNIP1Q8TAD8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNIP1Q8TAD8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.8■■□□□ 1.72
SNIP1Q8TAD8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNIP1Q8TAD8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.78■■□□□ 1.72
SNIP1Q8TAD8 MIR3648-2-201ENST00000581792 180 ntBASIC25.78■■□□□ 1.72
SNIP1Q8TAD8 MIR3648-1-201ENST00000615959 180 ntBASIC25.78■■□□□ 1.72
SNIP1Q8TAD8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNIP1Q8TAD8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.76■■□□□ 1.71
SNIP1Q8TAD8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNIP1Q8TAD8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNIP1Q8TAD8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SNIP1Q8TAD8 AC016575.1-201ENST00000607026 382 ntBASIC25.75■■□□□ 1.71
SNIP1Q8TAD8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.75■■□□□ 1.71
SNIP1Q8TAD8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNIP1Q8TAD8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.74■■□□□ 1.71
SNIP1Q8TAD8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.74■■□□□ 1.71
SNIP1Q8TAD8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNIP1Q8TAD8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.73■■□□□ 1.71
SNIP1Q8TAD8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.73■■□□□ 1.71
SNIP1Q8TAD8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNIP1Q8TAD8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNIP1Q8TAD8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.71■■□□□ 1.71
SNIP1Q8TAD8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SNIP1Q8TAD8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNIP1Q8TAD8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.69■■□□□ 1.7
SNIP1Q8TAD8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNIP1Q8TAD8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.68■■□□□ 1.7
SNIP1Q8TAD8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNIP1Q8TAD8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNIP1Q8TAD8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNIP1Q8TAD8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
SNIP1Q8TAD8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.65■■□□□ 1.7
SNIP1Q8TAD8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SNIP1Q8TAD8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNIP1Q8TAD8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.64■■□□□ 1.7
SNIP1Q8TAD8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SNIP1Q8TAD8 LINC01971-201ENST00000617888 1048 ntBASIC25.63■■□□□ 1.69
SNIP1Q8TAD8 CR559946.2-201ENST00000623684 991 ntBASIC25.63■■□□□ 1.69
SNIP1Q8TAD8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SNIP1Q8TAD8 AC108673.1-201ENST00000510422 1159 ntBASIC25.62■■□□□ 1.69
SNIP1Q8TAD8 DUX4L11-201ENST00000611504 1267 ntBASIC25.62■■□□□ 1.69
SNIP1Q8TAD8 DUX4L12-201ENST00000614593 1267 ntBASIC25.62■■□□□ 1.69
SNIP1Q8TAD8 DUX4L14-201ENST00000621227 1267 ntBASIC25.62■■□□□ 1.69
SNIP1Q8TAD8 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.59■■□□□ 1.69
SNIP1Q8TAD8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNIP1Q8TAD8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SNIP1Q8TAD8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNIP1Q8TAD8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SNIP1Q8TAD8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.57■■□□□ 1.68
SNIP1Q8TAD8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNIP1Q8TAD8 MIR6090-201ENST00000622481 60 ntBASIC25.55■■□□□ 1.68
SNIP1Q8TAD8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms