Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CNNM3Q8NE01 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.86■■■□□ 2.53
CNNM3Q8NE01 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.85■■■□□ 2.53
CNNM3Q8NE01 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.85■■■□□ 2.53
CNNM3Q8NE01 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CNNM3Q8NE01 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CNNM3Q8NE01 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CNNM3Q8NE01 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.82■■■□□ 2.52
CNNM3Q8NE01 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CNNM3Q8NE01 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
CNNM3Q8NE01 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.79■■■□□ 2.52
CNNM3Q8NE01 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.77■■■□□ 2.52
CNNM3Q8NE01 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CNNM3Q8NE01 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CNNM3Q8NE01 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
CNNM3Q8NE01 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.75■■■□□ 2.51
CNNM3Q8NE01 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.75■■■□□ 2.51
CNNM3Q8NE01 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.75■■■□□ 2.51
CNNM3Q8NE01 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CNNM3Q8NE01 SETD8P1-201ENST00000623146 1180 ntBASIC30.74■■■□□ 2.51
CNNM3Q8NE01 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.73■■■□□ 2.51
CNNM3Q8NE01 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CNNM3Q8NE01 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CNNM3Q8NE01 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CNNM3Q8NE01 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CNNM3Q8NE01 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CNNM3Q8NE01 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CNNM3Q8NE01 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CNNM3Q8NE01 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CNNM3Q8NE01 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CNNM3Q8NE01 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CNNM3Q8NE01 AC097358.2-201ENST00000607541 1159 ntBASIC30.68■■■□□ 2.5
CNNM3Q8NE01 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CNNM3Q8NE01 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CNNM3Q8NE01 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.65■■■□□ 2.5
CNNM3Q8NE01 ABCB10P1-201ENST00000614297 2181 ntBASIC30.62■■■□□ 2.49
CNNM3Q8NE01 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
CNNM3Q8NE01 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CNNM3Q8NE01 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CNNM3Q8NE01 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.61■■■□□ 2.49
CNNM3Q8NE01 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.59■■■□□ 2.49
CNNM3Q8NE01 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.59■■■□□ 2.49
CNNM3Q8NE01 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CNNM3Q8NE01 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CNNM3Q8NE01 AC136428.2-201ENST00000563187 214 ntBASIC30.58■■■□□ 2.49
CNNM3Q8NE01 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CNNM3Q8NE01 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.57■■■□□ 2.48
CNNM3Q8NE01 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.55■■■□□ 2.48
CNNM3Q8NE01 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CNNM3Q8NE01 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CNNM3Q8NE01 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CNNM3Q8NE01 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CNNM3Q8NE01 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.52■■■□□ 2.48
CNNM3Q8NE01 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CNNM3Q8NE01 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CNNM3Q8NE01 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CNNM3Q8NE01 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.47■■■□□ 2.47
CNNM3Q8NE01 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
CNNM3Q8NE01 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
CNNM3Q8NE01 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CNNM3Q8NE01 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.45■■■□□ 2.47
CNNM3Q8NE01 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.44■■■□□ 2.46
CNNM3Q8NE01 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CNNM3Q8NE01 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CNNM3Q8NE01 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CNNM3Q8NE01 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.42■■■□□ 2.46
CNNM3Q8NE01 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.42■■■□□ 2.46
CNNM3Q8NE01 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CNNM3Q8NE01 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CNNM3Q8NE01 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CNNM3Q8NE01 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CNNM3Q8NE01 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CNNM3Q8NE01 AL161658.1-201ENST00000623641 1967 ntBASIC30.39■■■□□ 2.46
CNNM3Q8NE01 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CNNM3Q8NE01 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CNNM3Q8NE01 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CNNM3Q8NE01 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CNNM3Q8NE01 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNNM3Q8NE01 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNNM3Q8NE01 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CNNM3Q8NE01 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CNNM3Q8NE01 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.36■■■□□ 2.45
CNNM3Q8NE01 SUZ12P1-203ENST00000578195 985 ntBASIC30.36■■■□□ 2.45
CNNM3Q8NE01 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CNNM3Q8NE01 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CNNM3Q8NE01 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CNNM3Q8NE01 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.34■■■□□ 2.45
CNNM3Q8NE01 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CNNM3Q8NE01 AL133380.1-201ENST00000506013 324 ntBASIC30.32■■■□□ 2.44
CNNM3Q8NE01 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.32■■■□□ 2.44
CNNM3Q8NE01 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CNNM3Q8NE01 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CNNM3Q8NE01 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CNNM3Q8NE01 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CNNM3Q8NE01 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.31■■■□□ 2.44
CNNM3Q8NE01 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
CNNM3Q8NE01 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.31■■■□□ 2.44
CNNM3Q8NE01 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CNNM3Q8NE01 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CNNM3Q8NE01 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms