Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SMRP1Q8NCR6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.96■■■□□ 2.23
SMRP1Q8NCR6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SMRP1Q8NCR6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.95■■■□□ 2.22
SMRP1Q8NCR6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMRP1Q8NCR6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMRP1Q8NCR6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMRP1Q8NCR6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.94■■■□□ 2.22
SMRP1Q8NCR6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMRP1Q8NCR6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.93■■■□□ 2.22
SMRP1Q8NCR6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.92■■■□□ 2.22
SMRP1Q8NCR6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.91■■■□□ 2.22
SMRP1Q8NCR6 MIR4449-201ENST00000578365 66 ntBASIC28.91■■■□□ 2.22
SMRP1Q8NCR6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMRP1Q8NCR6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.9■■■□□ 2.22
SMRP1Q8NCR6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMRP1Q8NCR6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
SMRP1Q8NCR6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMRP1Q8NCR6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.88■■■□□ 2.21
SMRP1Q8NCR6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMRP1Q8NCR6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMRP1Q8NCR6 DUX4L29-201ENST00000425409 679 ntBASIC28.86■■■□□ 2.21
SMRP1Q8NCR6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMRP1Q8NCR6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.85■■■□□ 2.21
SMRP1Q8NCR6 WASH5P-204ENST00000632292 975 ntBASIC28.85■■■□□ 2.21
SMRP1Q8NCR6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SMRP1Q8NCR6 MIR639-201ENST00000384974 98 ntBASIC28.81■■■□□ 2.2
SMRP1Q8NCR6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SMRP1Q8NCR6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.79■■■□□ 2.2
SMRP1Q8NCR6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SMRP1Q8NCR6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.77■■■□□ 2.2
SMRP1Q8NCR6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SMRP1Q8NCR6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SMRP1Q8NCR6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SMRP1Q8NCR6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SMRP1Q8NCR6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.73■■■□□ 2.19
SMRP1Q8NCR6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMRP1Q8NCR6 AC021231.2-201ENST00000594613 730 ntBASIC28.72■■■□□ 2.19
SMRP1Q8NCR6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SMRP1Q8NCR6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SMRP1Q8NCR6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.71■■■□□ 2.19
SMRP1Q8NCR6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMRP1Q8NCR6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMRP1Q8NCR6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.69■■■□□ 2.18
SMRP1Q8NCR6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SMRP1Q8NCR6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMRP1Q8NCR6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMRP1Q8NCR6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.67■■■□□ 2.18
SMRP1Q8NCR6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMRP1Q8NCR6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMRP1Q8NCR6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMRP1Q8NCR6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMRP1Q8NCR6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.66■■■□□ 2.18
SMRP1Q8NCR6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMRP1Q8NCR6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.63■■■□□ 2.17
SMRP1Q8NCR6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 MIR3648-2-201ENST00000581792 180 ntBASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 MIR3648-1-201ENST00000615959 180 ntBASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMRP1Q8NCR6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.6■■■□□ 2.17
SMRP1Q8NCR6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.6■■■□□ 2.17
SMRP1Q8NCR6 AC016575.1-201ENST00000607026 382 ntBASIC28.6■■■□□ 2.17
SMRP1Q8NCR6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.59■■■□□ 2.17
SMRP1Q8NCR6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.58■■■□□ 2.17
SMRP1Q8NCR6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SMRP1Q8NCR6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMRP1Q8NCR6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
SMRP1Q8NCR6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMRP1Q8NCR6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMRP1Q8NCR6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMRP1Q8NCR6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.53■■■□□ 2.16
SMRP1Q8NCR6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.53■■■□□ 2.16
SMRP1Q8NCR6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.52■■■□□ 2.16
SMRP1Q8NCR6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SMRP1Q8NCR6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SMRP1Q8NCR6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
SMRP1Q8NCR6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.5■■■□□ 2.15
SMRP1Q8NCR6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.5■■■□□ 2.15
SMRP1Q8NCR6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
SMRP1Q8NCR6 AC108673.1-201ENST00000510422 1159 ntBASIC28.48■■■□□ 2.15
SMRP1Q8NCR6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
SMRP1Q8NCR6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.47■■■□□ 2.15
SMRP1Q8NCR6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.47■■■□□ 2.15
SMRP1Q8NCR6 CR559946.2-201ENST00000623684 991 ntBASIC28.47■■■□□ 2.15
SMRP1Q8NCR6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.47■■■□□ 2.15
SMRP1Q8NCR6 MIR6090-201ENST00000622481 60 ntBASIC28.46■■■□□ 2.15
SMRP1Q8NCR6 DUX4L11-201ENST00000611504 1267 ntBASIC28.45■■■□□ 2.14
SMRP1Q8NCR6 DUX4L12-201ENST00000614593 1267 ntBASIC28.45■■■□□ 2.14
SMRP1Q8NCR6 LINC01971-201ENST00000617888 1048 ntBASIC28.45■■■□□ 2.14
SMRP1Q8NCR6 DUX4L14-201ENST00000621227 1267 ntBASIC28.45■■■□□ 2.14
SMRP1Q8NCR6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SMRP1Q8NCR6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SMRP1Q8NCR6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SMRP1Q8NCR6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
SMRP1Q8NCR6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.43■■■□□ 2.14
SMRP1Q8NCR6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMRP1Q8NCR6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms