Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
TPRX1Q8N7U7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPRX1Q8N7U7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPRX1Q8N7U7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPRX1Q8N7U7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPRX1Q8N7U7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPRX1Q8N7U7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPRX1Q8N7U7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.62■■□□□ 1.21
TPRX1Q8N7U7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.62■■□□□ 1.21
TPRX1Q8N7U7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TPRX1Q8N7U7 RARRES2P7-201ENST00000567349 469 ntBASIC22.61■■□□□ 1.21
TPRX1Q8N7U7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TPRX1Q8N7U7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TPRX1Q8N7U7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TPRX1Q8N7U7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TPRX1Q8N7U7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TPRX1Q8N7U7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TPRX1Q8N7U7 AL133380.1-201ENST00000506013 324 ntBASIC22.56■■□□□ 1.2
TPRX1Q8N7U7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.56■■□□□ 1.2
TPRX1Q8N7U7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TPRX1Q8N7U7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.54■■□□□ 1.2
TPRX1Q8N7U7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TPRX1Q8N7U7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TPRX1Q8N7U7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.53■■□□□ 1.2
TPRX1Q8N7U7 SETD8P1-201ENST00000623146 1180 ntBASIC22.52■■□□□ 1.2
TPRX1Q8N7U7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPRX1Q8N7U7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.51■■□□□ 1.19
TPRX1Q8N7U7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPRX1Q8N7U7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPRX1Q8N7U7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.49■■□□□ 1.19
TPRX1Q8N7U7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPRX1Q8N7U7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPRX1Q8N7U7 AL161658.1-201ENST00000623641 1967 ntBASIC22.47■■□□□ 1.19
TPRX1Q8N7U7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
TPRX1Q8N7U7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPRX1Q8N7U7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
TPRX1Q8N7U7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
TPRX1Q8N7U7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPRX1Q8N7U7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
TPRX1Q8N7U7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
TPRX1Q8N7U7 WASH5P-204ENST00000632292 975 ntBASIC22.41■■□□□ 1.18
TPRX1Q8N7U7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TPRX1Q8N7U7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TPRX1Q8N7U7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TPRX1Q8N7U7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TPRX1Q8N7U7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TPRX1Q8N7U7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TPRX1Q8N7U7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TPRX1Q8N7U7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.39■■□□□ 1.17
TPRX1Q8N7U7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.39■■□□□ 1.17
TPRX1Q8N7U7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TPRX1Q8N7U7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
TPRX1Q8N7U7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.37■■□□□ 1.17
TPRX1Q8N7U7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TPRX1Q8N7U7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TPRX1Q8N7U7 ABCB10P1-201ENST00000614297 2181 ntBASIC22.35■■□□□ 1.17
TPRX1Q8N7U7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TPRX1Q8N7U7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TPRX1Q8N7U7 AC097358.2-201ENST00000607541 1159 ntBASIC22.33■■□□□ 1.17
TPRX1Q8N7U7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TPRX1Q8N7U7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TPRX1Q8N7U7 AC136428.2-201ENST00000563187 214 ntBASIC22.32■■□□□ 1.16
TPRX1Q8N7U7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.32■■□□□ 1.16
TPRX1Q8N7U7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TPRX1Q8N7U7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TPRX1Q8N7U7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TPRX1Q8N7U7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TPRX1Q8N7U7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TPRX1Q8N7U7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TPRX1Q8N7U7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TPRX1Q8N7U7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPRX1Q8N7U7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TPRX1Q8N7U7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.26■■□□□ 1.15
TPRX1Q8N7U7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.26■■□□□ 1.15
TPRX1Q8N7U7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPRX1Q8N7U7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TPRX1Q8N7U7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.25■■□□□ 1.15
TPRX1Q8N7U7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPRX1Q8N7U7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.24■■□□□ 1.15
TPRX1Q8N7U7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.24■■□□□ 1.15
TPRX1Q8N7U7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TPRX1Q8N7U7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TPRX1Q8N7U7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.24■■□□□ 1.15
TPRX1Q8N7U7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPRX1Q8N7U7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
TPRX1Q8N7U7 CAHM-201ENST00000604200 896 ntBASIC22.23■■□□□ 1.15
TPRX1Q8N7U7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms