Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 SUZ12P1-203ENST00000578195 985 ntBASIC36.01■■■■□ 3.36
NGEFQ8N5V2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
NGEFQ8N5V2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC35.97■■■■□ 3.35
NGEFQ8N5V2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
NGEFQ8N5V2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
NGEFQ8N5V2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
NGEFQ8N5V2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC35.93■■■■□ 3.34
NGEFQ8N5V2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC35.92■■■■□ 3.34
NGEFQ8N5V2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
NGEFQ8N5V2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
NGEFQ8N5V2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
NGEFQ8N5V2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
NGEFQ8N5V2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
NGEFQ8N5V2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC35.85■■■■□ 3.33
NGEFQ8N5V2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.85■■■■□ 3.33
NGEFQ8N5V2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
NGEFQ8N5V2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.84■■■■□ 3.33
NGEFQ8N5V2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC35.84■■■■□ 3.33
NGEFQ8N5V2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC35.84■■■■□ 3.33
NGEFQ8N5V2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
NGEFQ8N5V2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC35.82■■■■□ 3.33
NGEFQ8N5V2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
NGEFQ8N5V2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.82■■■■□ 3.32
NGEFQ8N5V2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
NGEFQ8N5V2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.81■■■■□ 3.32
NGEFQ8N5V2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
NGEFQ8N5V2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
NGEFQ8N5V2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
NGEFQ8N5V2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.8■■■■□ 3.32
NGEFQ8N5V2 AL133380.1-201ENST00000506013 324 ntBASIC35.8■■■■□ 3.32
NGEFQ8N5V2 CAHM-201ENST00000604200 896 ntBASIC35.8■■■■□ 3.32
NGEFQ8N5V2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
NGEFQ8N5V2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
NGEFQ8N5V2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.78■■■■□ 3.32
NGEFQ8N5V2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC35.78■■■■□ 3.32
NGEFQ8N5V2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
NGEFQ8N5V2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
NGEFQ8N5V2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.74■■■■□ 3.31
NGEFQ8N5V2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC35.74■■■■□ 3.31
NGEFQ8N5V2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
NGEFQ8N5V2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
NGEFQ8N5V2 RPS2P35-201ENST00000443417 897 ntBASIC35.71■■■■□ 3.31
NGEFQ8N5V2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
NGEFQ8N5V2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
NGEFQ8N5V2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC35.67■■■■□ 3.3
NGEFQ8N5V2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
NGEFQ8N5V2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.66■■■■□ 3.3
NGEFQ8N5V2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.65■■■■□ 3.3
NGEFQ8N5V2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
NGEFQ8N5V2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC35.64■■■■□ 3.3
NGEFQ8N5V2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC35.63■■■■□ 3.29
NGEFQ8N5V2 WASH5P-204ENST00000632292 975 ntBASIC35.63■■■■□ 3.29
NGEFQ8N5V2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
NGEFQ8N5V2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC35.62■■■■□ 3.29
NGEFQ8N5V2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
NGEFQ8N5V2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.61■■■■□ 3.29
NGEFQ8N5V2 AL391121.1-201ENST00000607967 1349 ntBASIC35.6■■■■□ 3.29
NGEFQ8N5V2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
NGEFQ8N5V2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
NGEFQ8N5V2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
NGEFQ8N5V2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
NGEFQ8N5V2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.56■■■■□ 3.28
NGEFQ8N5V2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
NGEFQ8N5V2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
NGEFQ8N5V2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NGEFQ8N5V2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
NGEFQ8N5V2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
NGEFQ8N5V2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.5■■■■□ 3.27
NGEFQ8N5V2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
NGEFQ8N5V2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
NGEFQ8N5V2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
NGEFQ8N5V2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.49■■■■□ 3.27
NGEFQ8N5V2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC35.48■■■■□ 3.27
NGEFQ8N5V2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
NGEFQ8N5V2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC35.47■■■■□ 3.27
NGEFQ8N5V2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
NGEFQ8N5V2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.45■■■■□ 3.27
NGEFQ8N5V2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.43■■■■□ 3.26
NGEFQ8N5V2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
NGEFQ8N5V2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
NGEFQ8N5V2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
NGEFQ8N5V2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.39■■■■□ 3.26
NGEFQ8N5V2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
NGEFQ8N5V2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
NGEFQ8N5V2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.38■■■■□ 3.25
NGEFQ8N5V2 AL162393.1-201ENST00000437852 946 ntBASIC35.38■■■■□ 3.25
NGEFQ8N5V2 AL161658.1-201ENST00000623641 1967 ntBASIC35.38■■■■□ 3.25
NGEFQ8N5V2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.37■■■■□ 3.25
NGEFQ8N5V2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
NGEFQ8N5V2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
NGEFQ8N5V2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
NGEFQ8N5V2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
NGEFQ8N5V2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
NGEFQ8N5V2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
NGEFQ8N5V2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
NGEFQ8N5V2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
NGEFQ8N5V2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
NGEFQ8N5V2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
NGEFQ8N5V2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
NGEFQ8N5V2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms