Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.97■■■□□ 2.23
TTC39CQ8N584 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TTC39CQ8N584 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
TTC39CQ8N584 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
TTC39CQ8N584 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.94■■■□□ 2.22
TTC39CQ8N584 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.94■■■□□ 2.22
TTC39CQ8N584 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 AL391121.1-201ENST00000607967 1349 ntBASIC28.93■■■□□ 2.22
TTC39CQ8N584 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TTC39CQ8N584 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
TTC39CQ8N584 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TTC39CQ8N584 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.91■■■□□ 2.22
TTC39CQ8N584 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TTC39CQ8N584 CAHM-201ENST00000604200 896 ntBASIC28.9■■■□□ 2.22
TTC39CQ8N584 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
TTC39CQ8N584 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
TTC39CQ8N584 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TTC39CQ8N584 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
TTC39CQ8N584 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TTC39CQ8N584 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.86■■■□□ 2.21
TTC39CQ8N584 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TTC39CQ8N584 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.84■■■□□ 2.21
TTC39CQ8N584 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.84■■■□□ 2.21
TTC39CQ8N584 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TTC39CQ8N584 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.82■■■□□ 2.2
TTC39CQ8N584 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TTC39CQ8N584 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
TTC39CQ8N584 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.81■■■□□ 2.2
TTC39CQ8N584 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TTC39CQ8N584 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TTC39CQ8N584 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC39CQ8N584 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
TTC39CQ8N584 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC39CQ8N584 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.75■■■□□ 2.19
TTC39CQ8N584 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TTC39CQ8N584 SUZ12P1-203ENST00000578195 985 ntBASIC28.74■■■□□ 2.19
TTC39CQ8N584 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TTC39CQ8N584 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.71■■■□□ 2.19
TTC39CQ8N584 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TTC39CQ8N584 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC39CQ8N584 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.7■■■□□ 2.18
TTC39CQ8N584 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.69■■■□□ 2.18
TTC39CQ8N584 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TTC39CQ8N584 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC39CQ8N584 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.66■■■□□ 2.18
TTC39CQ8N584 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
TTC39CQ8N584 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.64■■■□□ 2.18
TTC39CQ8N584 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
TTC39CQ8N584 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC39CQ8N584 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.63■■■□□ 2.17
TTC39CQ8N584 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39CQ8N584 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC39CQ8N584 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TTC39CQ8N584 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TTC39CQ8N584 AL161658.1-201ENST00000623641 1967 ntBASIC28.59■■■□□ 2.17
TTC39CQ8N584 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
TTC39CQ8N584 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
TTC39CQ8N584 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.57■■■□□ 2.16
TTC39CQ8N584 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TTC39CQ8N584 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.55■■■□□ 2.16
TTC39CQ8N584 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.54■■■□□ 2.16
TTC39CQ8N584 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39CQ8N584 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.54■■■□□ 2.16
TTC39CQ8N584 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39CQ8N584 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.53■■■□□ 2.16
TTC39CQ8N584 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.52■■■□□ 2.16
TTC39CQ8N584 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
TTC39CQ8N584 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
TTC39CQ8N584 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TTC39CQ8N584 MIR762-201ENST00000390236 83 ntBASIC28.51■■■□□ 2.15
TTC39CQ8N584 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC39CQ8N584 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.5■■■□□ 2.15
TTC39CQ8N584 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.5■■■□□ 2.15
TTC39CQ8N584 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC39CQ8N584 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TTC39CQ8N584 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.49■■■□□ 2.15
TTC39CQ8N584 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms