Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.98■■■□□ 2.07
SYNPOQ8N3V7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SYNPOQ8N3V7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.97■■■□□ 2.07
SYNPOQ8N3V7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 HLA-V-202ENST00000446817 847 ntBASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 WASH5P-204ENST00000632292 975 ntBASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.93■■■□□ 2.06
SYNPOQ8N3V7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SYNPOQ8N3V7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
SYNPOQ8N3V7 ZNRF2P2-203ENST00000454624 420 ntBASIC27.89■■■□□ 2.06
SYNPOQ8N3V7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
SYNPOQ8N3V7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
SYNPOQ8N3V7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SYNPOQ8N3V7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SYNPOQ8N3V7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.82■■■□□ 2.04
SYNPOQ8N3V7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.81■■■□□ 2.04
SYNPOQ8N3V7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SYNPOQ8N3V7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SYNPOQ8N3V7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.78■■■□□ 2.04
SYNPOQ8N3V7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SYNPOQ8N3V7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.76■■■□□ 2.03
SYNPOQ8N3V7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SYNPOQ8N3V7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SYNPOQ8N3V7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 DUX4L29-201ENST00000425409 679 ntBASIC27.71■■■□□ 2.03
SYNPOQ8N3V7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.7■■■□□ 2.02
SYNPOQ8N3V7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SYNPOQ8N3V7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SYNPOQ8N3V7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
SYNPOQ8N3V7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SYNPOQ8N3V7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SYNPOQ8N3V7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.63■■■□□ 2.01
SYNPOQ8N3V7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SYNPOQ8N3V7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SYNPOQ8N3V7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SYNPOQ8N3V7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.57■■■□□ 2
SYNPOQ8N3V7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.55■■■□□ 2
SYNPOQ8N3V7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.54■■■□□ 2
SYNPOQ8N3V7 AC021231.2-201ENST00000594613 730 ntBASIC27.54■■■□□ 2
SYNPOQ8N3V7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SYNPOQ8N3V7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.53■■■□□ 2
SYNPOQ8N3V7 MIR4449-201ENST00000578365 66 ntBASIC27.53■■■□□ 2
SYNPOQ8N3V7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
SYNPOQ8N3V7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
SYNPOQ8N3V7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SYNPOQ8N3V7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.52■■■□□ 2
SYNPOQ8N3V7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SYNPOQ8N3V7 AC108673.1-201ENST00000510422 1159 ntBASIC27.51■■□□□ 1.99
SYNPOQ8N3V7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNPOQ8N3V7 MIR639-201ENST00000384974 98 ntBASIC27.5■■□□□ 1.99
SYNPOQ8N3V7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.48■■□□□ 1.99
SYNPOQ8N3V7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.48■■□□□ 1.99
SYNPOQ8N3V7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.46■■□□□ 1.99
SYNPOQ8N3V7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SYNPOQ8N3V7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.45■■□□□ 1.99
SYNPOQ8N3V7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.45■■□□□ 1.98
SYNPOQ8N3V7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
SYNPOQ8N3V7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SYNPOQ8N3V7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms