Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LSMEM2Q8N112 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LSMEM2Q8N112 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LSMEM2Q8N112 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.2■■□□□ 1.94
LSMEM2Q8N112 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LSMEM2Q8N112 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.19■■□□□ 1.94
LSMEM2Q8N112 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
LSMEM2Q8N112 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.17■■□□□ 1.94
LSMEM2Q8N112 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.15■■□□□ 1.94
LSMEM2Q8N112 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
LSMEM2Q8N112 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LSMEM2Q8N112 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.15■■□□□ 1.94
LSMEM2Q8N112 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSMEM2Q8N112 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.14■■□□□ 1.94
LSMEM2Q8N112 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.14■■□□□ 1.94
LSMEM2Q8N112 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.13■■□□□ 1.93
LSMEM2Q8N112 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LSMEM2Q8N112 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
LSMEM2Q8N112 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
LSMEM2Q8N112 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LSMEM2Q8N112 AP006261.1-201ENST00000584783 668 ntBASIC27.11■■□□□ 1.93
LSMEM2Q8N112 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LSMEM2Q8N112 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LSMEM2Q8N112 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
LSMEM2Q8N112 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LSMEM2Q8N112 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.08■■□□□ 1.93
LSMEM2Q8N112 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LSMEM2Q8N112 AC120057.4-201ENST00000624722 1615 ntBASIC27.07■■□□□ 1.92
LSMEM2Q8N112 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LSMEM2Q8N112 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
LSMEM2Q8N112 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.05■■□□□ 1.92
LSMEM2Q8N112 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LSMEM2Q8N112 CAHM-201ENST00000604200 896 ntBASIC27.04■■□□□ 1.92
LSMEM2Q8N112 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LSMEM2Q8N112 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LSMEM2Q8N112 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
LSMEM2Q8N112 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LSMEM2Q8N112 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.01■■□□□ 1.91
LSMEM2Q8N112 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LSMEM2Q8N112 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LSMEM2Q8N112 AL162393.1-201ENST00000437852 946 ntBASIC27■■□□□ 1.91
LSMEM2Q8N112 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27■■□□□ 1.91
LSMEM2Q8N112 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.99■■□□□ 1.91
LSMEM2Q8N112 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LSMEM2Q8N112 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
LSMEM2Q8N112 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.98■■□□□ 1.91
LSMEM2Q8N112 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LSMEM2Q8N112 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LSMEM2Q8N112 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LSMEM2Q8N112 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LSMEM2Q8N112 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LSMEM2Q8N112 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
LSMEM2Q8N112 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
LSMEM2Q8N112 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
LSMEM2Q8N112 AL391121.1-201ENST00000607967 1349 ntBASIC26.94■■□□□ 1.9
LSMEM2Q8N112 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LSMEM2Q8N112 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
LSMEM2Q8N112 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.91■■□□□ 1.9
LSMEM2Q8N112 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
LSMEM2Q8N112 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.9■■□□□ 1.9
LSMEM2Q8N112 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.9■■□□□ 1.9
LSMEM2Q8N112 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
LSMEM2Q8N112 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
LSMEM2Q8N112 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LSMEM2Q8N112 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
LSMEM2Q8N112 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LSMEM2Q8N112 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSMEM2Q8N112 ABCB10P1-201ENST00000614297 2181 ntBASIC26.87■■□□□ 1.89
LSMEM2Q8N112 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSMEM2Q8N112 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.87■■□□□ 1.89
LSMEM2Q8N112 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSMEM2Q8N112 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.87■■□□□ 1.89
LSMEM2Q8N112 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSMEM2Q8N112 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
LSMEM2Q8N112 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LSMEM2Q8N112 AL133380.1-201ENST00000506013 324 ntBASIC26.83■■□□□ 1.89
LSMEM2Q8N112 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.83■■□□□ 1.89
LSMEM2Q8N112 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LSMEM2Q8N112 MIR3665-201ENST00000578708 105 ntBASIC26.81■■□□□ 1.88
LSMEM2Q8N112 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LSMEM2Q8N112 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LSMEM2Q8N112 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LSMEM2Q8N112 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.8■■□□□ 1.88
LSMEM2Q8N112 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LSMEM2Q8N112 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LSMEM2Q8N112 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.79■■□□□ 1.88
LSMEM2Q8N112 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.79■■□□□ 1.88
LSMEM2Q8N112 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
LSMEM2Q8N112 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.77■■□□□ 1.88
LSMEM2Q8N112 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LSMEM2Q8N112 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LSMEM2Q8N112 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
LSMEM2Q8N112 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.75■■□□□ 1.87
LSMEM2Q8N112 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.75■■□□□ 1.87
LSMEM2Q8N112 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.75■■□□□ 1.87
LSMEM2Q8N112 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LSMEM2Q8N112 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.73■■□□□ 1.87
LSMEM2Q8N112 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LSMEM2Q8N112 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LSMEM2Q8N112 ABHD17AP4-201ENST00000411545 909 ntBASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms