Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCUBE1Q8IWY4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.66■■□□□ 1.86
SCUBE1Q8IWY4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCUBE1Q8IWY4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SCUBE1Q8IWY4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SCUBE1Q8IWY4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SCUBE1Q8IWY4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCUBE1Q8IWY4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCUBE1Q8IWY4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.6■■□□□ 1.85
SCUBE1Q8IWY4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.6■■□□□ 1.85
SCUBE1Q8IWY4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SCUBE1Q8IWY4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SCUBE1Q8IWY4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCUBE1Q8IWY4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCUBE1Q8IWY4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCUBE1Q8IWY4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCUBE1Q8IWY4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.54■■□□□ 1.84
SCUBE1Q8IWY4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCUBE1Q8IWY4 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.54■■□□□ 1.84
SCUBE1Q8IWY4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SCUBE1Q8IWY4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.54■■□□□ 1.84
SCUBE1Q8IWY4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.53■■□□□ 1.84
SCUBE1Q8IWY4 AC139426.1-201ENST00000568218 2529 ntBASIC26.53■■□□□ 1.84
SCUBE1Q8IWY4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCUBE1Q8IWY4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCUBE1Q8IWY4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
SCUBE1Q8IWY4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.51■■□□□ 1.83
SCUBE1Q8IWY4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.5■■□□□ 1.83
SCUBE1Q8IWY4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SCUBE1Q8IWY4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.49■■□□□ 1.83
SCUBE1Q8IWY4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.49■■□□□ 1.83
SCUBE1Q8IWY4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SCUBE1Q8IWY4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCUBE1Q8IWY4 AC120057.4-201ENST00000624722 1615 ntBASIC26.47■■□□□ 1.83
SCUBE1Q8IWY4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
SCUBE1Q8IWY4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCUBE1Q8IWY4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SCUBE1Q8IWY4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SCUBE1Q8IWY4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.44■■□□□ 1.82
SCUBE1Q8IWY4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCUBE1Q8IWY4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.43■■□□□ 1.82
SCUBE1Q8IWY4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
SCUBE1Q8IWY4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.41■■□□□ 1.82
SCUBE1Q8IWY4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCUBE1Q8IWY4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCUBE1Q8IWY4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCUBE1Q8IWY4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCUBE1Q8IWY4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.82
SCUBE1Q8IWY4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.39■■□□□ 1.81
SCUBE1Q8IWY4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SCUBE1Q8IWY4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCUBE1Q8IWY4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCUBE1Q8IWY4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCUBE1Q8IWY4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCUBE1Q8IWY4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
SCUBE1Q8IWY4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCUBE1Q8IWY4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCUBE1Q8IWY4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.3■■□□□ 1.8
SCUBE1Q8IWY4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCUBE1Q8IWY4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SCUBE1Q8IWY4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SCUBE1Q8IWY4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCUBE1Q8IWY4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCUBE1Q8IWY4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.27■■□□□ 1.8
SCUBE1Q8IWY4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCUBE1Q8IWY4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCUBE1Q8IWY4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.26■■□□□ 1.79
SCUBE1Q8IWY4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SCUBE1Q8IWY4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCUBE1Q8IWY4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SCUBE1Q8IWY4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.24■■□□□ 1.79
SCUBE1Q8IWY4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCUBE1Q8IWY4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCUBE1Q8IWY4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCUBE1Q8IWY4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCUBE1Q8IWY4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCUBE1Q8IWY4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.22■■□□□ 1.79
SCUBE1Q8IWY4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCUBE1Q8IWY4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCUBE1Q8IWY4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCUBE1Q8IWY4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCUBE1Q8IWY4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCUBE1Q8IWY4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.2■■□□□ 1.78
SCUBE1Q8IWY4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
SCUBE1Q8IWY4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCUBE1Q8IWY4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.17■■□□□ 1.78
SCUBE1Q8IWY4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCUBE1Q8IWY4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCUBE1Q8IWY4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCUBE1Q8IWY4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.15■■□□□ 1.78
SCUBE1Q8IWY4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.14■■□□□ 1.78
SCUBE1Q8IWY4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SCUBE1Q8IWY4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCUBE1Q8IWY4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCUBE1Q8IWY4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms