Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 AC097358.2-201ENST00000607541 1159 ntBASIC26.51■■□□□ 1.83
CCSMST1Q4G0I0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CCSMST1Q4G0I0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.5■■□□□ 1.83
CCSMST1Q4G0I0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.5■■□□□ 1.83
CCSMST1Q4G0I0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCSMST1Q4G0I0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.49■■□□□ 1.83
CCSMST1Q4G0I0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
CCSMST1Q4G0I0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.48■■□□□ 1.83
CCSMST1Q4G0I0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCSMST1Q4G0I0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCSMST1Q4G0I0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCSMST1Q4G0I0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCSMST1Q4G0I0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCSMST1Q4G0I0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCSMST1Q4G0I0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.44■■□□□ 1.82
CCSMST1Q4G0I0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
CCSMST1Q4G0I0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCSMST1Q4G0I0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.43■■□□□ 1.82
CCSMST1Q4G0I0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.42■■□□□ 1.82
CCSMST1Q4G0I0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCSMST1Q4G0I0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCSMST1Q4G0I0 CAHM-201ENST00000604200 896 ntBASIC26.41■■□□□ 1.82
CCSMST1Q4G0I0 WASH5P-204ENST00000632292 975 ntBASIC26.41■■□□□ 1.82
CCSMST1Q4G0I0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCSMST1Q4G0I0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCSMST1Q4G0I0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCSMST1Q4G0I0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCSMST1Q4G0I0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.37■■□□□ 1.81
CCSMST1Q4G0I0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCSMST1Q4G0I0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCSMST1Q4G0I0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCSMST1Q4G0I0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCSMST1Q4G0I0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCSMST1Q4G0I0 AL391121.1-201ENST00000607967 1349 ntBASIC26.33■■□□□ 1.81
CCSMST1Q4G0I0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCSMST1Q4G0I0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.32■■□□□ 1.8
CCSMST1Q4G0I0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.32■■□□□ 1.8
CCSMST1Q4G0I0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCSMST1Q4G0I0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCSMST1Q4G0I0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCSMST1Q4G0I0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
CCSMST1Q4G0I0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCSMST1Q4G0I0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.29■■□□□ 1.8
CCSMST1Q4G0I0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.29■■□□□ 1.8
CCSMST1Q4G0I0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.28■■□□□ 1.8
CCSMST1Q4G0I0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCSMST1Q4G0I0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.28■■□□□ 1.8
CCSMST1Q4G0I0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCSMST1Q4G0I0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCSMST1Q4G0I0 AL161658.1-201ENST00000623641 1967 ntBASIC26.26■■□□□ 1.79
CCSMST1Q4G0I0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCSMST1Q4G0I0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCSMST1Q4G0I0 SUZ12P1-203ENST00000578195 985 ntBASIC26.24■■□□□ 1.79
CCSMST1Q4G0I0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.24■■□□□ 1.79
CCSMST1Q4G0I0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCSMST1Q4G0I0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCSMST1Q4G0I0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.22■■□□□ 1.79
CCSMST1Q4G0I0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.22■■□□□ 1.79
CCSMST1Q4G0I0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CCSMST1Q4G0I0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCSMST1Q4G0I0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.21■■□□□ 1.79
CCSMST1Q4G0I0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCSMST1Q4G0I0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCSMST1Q4G0I0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
CCSMST1Q4G0I0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCSMST1Q4G0I0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CCSMST1Q4G0I0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCSMST1Q4G0I0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCSMST1Q4G0I0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCSMST1Q4G0I0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCSMST1Q4G0I0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCSMST1Q4G0I0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSMST1Q4G0I0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCSMST1Q4G0I0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.14■■□□□ 1.78
CCSMST1Q4G0I0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CCSMST1Q4G0I0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CCSMST1Q4G0I0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCSMST1Q4G0I0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCSMST1Q4G0I0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCSMST1Q4G0I0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCSMST1Q4G0I0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCSMST1Q4G0I0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.11■■□□□ 1.77
CCSMST1Q4G0I0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
CCSMST1Q4G0I0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.1■■□□□ 1.77
CCSMST1Q4G0I0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSMST1Q4G0I0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSMST1Q4G0I0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCSMST1Q4G0I0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCSMST1Q4G0I0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.07■■□□□ 1.76
CCSMST1Q4G0I0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSMST1Q4G0I0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSMST1Q4G0I0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSMST1Q4G0I0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSMST1Q4G0I0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSMST1Q4G0I0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCSMST1Q4G0I0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.05■■□□□ 1.76
CCSMST1Q4G0I0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.05■■□□□ 1.76
CCSMST1Q4G0I0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCSMST1Q4G0I0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CCSMST1Q4G0I0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms