Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
USH1GQ495M9 AL162393.1-201ENST00000437852 946 ntBASIC31.44■■■□□ 2.62
USH1GQ495M9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.44■■■□□ 2.62
USH1GQ495M9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.42■■■□□ 2.62
USH1GQ495M9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
USH1GQ495M9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
USH1GQ495M9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USH1GQ495M9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.37■■■□□ 2.61
USH1GQ495M9 AP006261.1-201ENST00000584783 668 ntBASIC31.37■■■□□ 2.61
USH1GQ495M9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USH1GQ495M9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USH1GQ495M9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USH1GQ495M9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USH1GQ495M9 MIR762-201ENST00000390236 83 ntBASIC31.34■■■□□ 2.61
USH1GQ495M9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.34■■■□□ 2.61
USH1GQ495M9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USH1GQ495M9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
USH1GQ495M9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USH1GQ495M9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
USH1GQ495M9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.29■■■□□ 2.6
USH1GQ495M9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.29■■■□□ 2.6
USH1GQ495M9 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.29■■■□□ 2.6
USH1GQ495M9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
USH1GQ495M9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USH1GQ495M9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USH1GQ495M9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.26■■■□□ 2.59
USH1GQ495M9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
USH1GQ495M9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
USH1GQ495M9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
USH1GQ495M9 MIR3665-201ENST00000578708 105 ntBASIC31.24■■■□□ 2.59
USH1GQ495M9 DUX4L28-201ENST00000623687 678 ntBASIC31.24■■■□□ 2.59
USH1GQ495M9 AC120057.4-201ENST00000624722 1615 ntBASIC31.23■■■□□ 2.59
USH1GQ495M9 AC005559.1-201ENST00000589661 871 ntBASIC31.21■■■□□ 2.59
USH1GQ495M9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USH1GQ495M9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
USH1GQ495M9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
USH1GQ495M9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
USH1GQ495M9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USH1GQ495M9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USH1GQ495M9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.16■■■□□ 2.58
USH1GQ495M9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.16■■■□□ 2.58
USH1GQ495M9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
USH1GQ495M9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
USH1GQ495M9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
USH1GQ495M9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
USH1GQ495M9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
USH1GQ495M9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
USH1GQ495M9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
USH1GQ495M9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USH1GQ495M9 AC087741.3-201ENST00000624270 1347 ntBASIC31.12■■■□□ 2.57
USH1GQ495M9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USH1GQ495M9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USH1GQ495M9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USH1GQ495M9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
USH1GQ495M9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
USH1GQ495M9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.08■■■□□ 2.57
USH1GQ495M9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USH1GQ495M9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.08■■■□□ 2.57
USH1GQ495M9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.08■■■□□ 2.57
USH1GQ495M9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
USH1GQ495M9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
USH1GQ495M9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
USH1GQ495M9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.05■■■□□ 2.56
USH1GQ495M9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USH1GQ495M9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
USH1GQ495M9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USH1GQ495M9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USH1GQ495M9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.02■■■□□ 2.56
USH1GQ495M9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
USH1GQ495M9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
USH1GQ495M9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
USH1GQ495M9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USH1GQ495M9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
USH1GQ495M9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
USH1GQ495M9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
USH1GQ495M9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.97■■■□□ 2.55
USH1GQ495M9 AC044849.2-201ENST00000606596 710 ntBASIC30.97■■■□□ 2.55
USH1GQ495M9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
USH1GQ495M9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USH1GQ495M9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
USH1GQ495M9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
USH1GQ495M9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
USH1GQ495M9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
USH1GQ495M9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.93■■■□□ 2.54
USH1GQ495M9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.93■■■□□ 2.54
USH1GQ495M9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
USH1GQ495M9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.92■■■□□ 2.54
USH1GQ495M9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USH1GQ495M9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USH1GQ495M9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USH1GQ495M9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USH1GQ495M9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USH1GQ495M9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.87■■■□□ 2.53
USH1GQ495M9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
USH1GQ495M9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.86■■■□□ 2.53
USH1GQ495M9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
USH1GQ495M9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
USH1GQ495M9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.85■■■□□ 2.53
USH1GQ495M9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
USH1GQ495M9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms