Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
PDS5AQ29RF7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
PDS5AQ29RF7 MIR762-201ENST00000390236 83 ntBASIC33.11■■■□□ 2.89
PDS5AQ29RF7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
PDS5AQ29RF7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.09■■■□□ 2.89
PDS5AQ29RF7 MIR3665-201ENST00000578708 105 ntBASIC33.09■■■□□ 2.89
PDS5AQ29RF7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PDS5AQ29RF7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PDS5AQ29RF7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC33.06■■■□□ 2.88
PDS5AQ29RF7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
PDS5AQ29RF7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PDS5AQ29RF7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PDS5AQ29RF7 DUX4L28-201ENST00000623687 678 ntBASIC33.03■■■□□ 2.88
PDS5AQ29RF7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PDS5AQ29RF7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PDS5AQ29RF7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
PDS5AQ29RF7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.01■■■□□ 2.87
PDS5AQ29RF7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.99■■■□□ 2.87
PDS5AQ29RF7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
PDS5AQ29RF7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PDS5AQ29RF7 AC005559.1-201ENST00000589661 871 ntBASIC32.98■■■□□ 2.87
PDS5AQ29RF7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
PDS5AQ29RF7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.96■■■□□ 2.87
PDS5AQ29RF7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PDS5AQ29RF7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PDS5AQ29RF7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.86
PDS5AQ29RF7 AC087741.3-201ENST00000624270 1347 ntBASIC32.95■■■□□ 2.86
PDS5AQ29RF7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PDS5AQ29RF7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
PDS5AQ29RF7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.9■■■□□ 2.86
PDS5AQ29RF7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PDS5AQ29RF7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
PDS5AQ29RF7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PDS5AQ29RF7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.86■■■□□ 2.85
PDS5AQ29RF7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 AC120057.4-201ENST00000624722 1615 ntBASIC32.84■■■□□ 2.85
PDS5AQ29RF7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
PDS5AQ29RF7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.8■■■□□ 2.84
PDS5AQ29RF7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.79■■■□□ 2.84
PDS5AQ29RF7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
PDS5AQ29RF7 AC044849.2-201ENST00000606596 710 ntBASIC32.78■■■□□ 2.84
PDS5AQ29RF7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PDS5AQ29RF7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PDS5AQ29RF7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PDS5AQ29RF7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.75■■■□□ 2.83
PDS5AQ29RF7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.74■■■□□ 2.83
PDS5AQ29RF7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PDS5AQ29RF7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
PDS5AQ29RF7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
PDS5AQ29RF7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.68■■■□□ 2.82
PDS5AQ29RF7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
PDS5AQ29RF7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PDS5AQ29RF7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PDS5AQ29RF7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PDS5AQ29RF7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PDS5AQ29RF7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PDS5AQ29RF7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PDS5AQ29RF7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PDS5AQ29RF7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
PDS5AQ29RF7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PDS5AQ29RF7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
PDS5AQ29RF7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PDS5AQ29RF7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.6■■■□□ 2.81
PDS5AQ29RF7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.59■■■□□ 2.81
PDS5AQ29RF7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
PDS5AQ29RF7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDS5AQ29RF7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDS5AQ29RF7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PDS5AQ29RF7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.56■■■□□ 2.8
PDS5AQ29RF7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.54■■■□□ 2.8
PDS5AQ29RF7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PDS5AQ29RF7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PDS5AQ29RF7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PDS5AQ29RF7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms