Protein–RNA interactions for Protein: P51911

CNN1, Calponin-1, humanhuman

Known RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1P51911 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNN1P51911 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNN1P51911 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNN1P51911 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNN1P51911 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.1■□□□□ 0.97
CNN1P51911 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CNN1P51911 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CNN1P51911 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNN1P51911 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNN1P51911 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNN1P51911 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNN1P51911 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNN1P51911 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.07■□□□□ 0.96
CNN1P51911 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CNN1P51911 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNN1P51911 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.06■□□□□ 0.96
CNN1P51911 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNN1P51911 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.03■□□□□ 0.96
CNN1P51911 AC120057.4-201ENST00000624722 1615 ntBASIC21.02■□□□□ 0.96
CNN1P51911 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN1P51911 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.01■□□□□ 0.95
CNN1P51911 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.01■□□□□ 0.95
CNN1P51911 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNN1P51911 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNN1P51911 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNN1P51911 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNN1P51911 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.99■□□□□ 0.95
CNN1P51911 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNN1P51911 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNN1P51911 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNN1P51911 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNN1P51911 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNN1P51911 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN1P51911 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN1P51911 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNN1P51911 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNN1P51911 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN1P51911 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.93■□□□□ 0.94
CNN1P51911 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.93■□□□□ 0.94
CNN1P51911 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.93■□□□□ 0.94
CNN1P51911 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CNN1P51911 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN1P51911 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN1P51911 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN1P51911 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.92■□□□□ 0.94
CNN1P51911 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN1P51911 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CNN1P51911 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNN1P51911 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CNN1P51911 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNN1P51911 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNN1P51911 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNN1P51911 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CNN1P51911 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNN1P51911 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CNN1P51911 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNN1P51911 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CNN1P51911 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNN1P51911 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNN1P51911 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNN1P51911 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
CNN1P51911 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.85■□□□□ 0.93
CNN1P51911 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNN1P51911 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.85■□□□□ 0.93
CNN1P51911 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNN1P51911 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNN1P51911 AC135731.1-201ENST00000569415 2548 ntBASIC20.84■□□□□ 0.93
CNN1P51911 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNN1P51911 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.84■□□□□ 0.93
CNN1P51911 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNN1P51911 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNN1P51911 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.82■□□□□ 0.92
CNN1P51911 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNN1P51911 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNN1P51911 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CNN1P51911 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNN1P51911 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNN1P51911 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNN1P51911 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNN1P51911 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNN1P51911 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNN1P51911 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNN1P51911 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNN1P51911 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CNN1P51911 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNN1P51911 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNN1P51911 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNN1P51911 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNN1P51911 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CNN1P51911 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNN1P51911 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.76■□□□□ 0.91
CNN1P51911 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNN1P51911 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNN1P51911 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.75■□□□□ 0.91
CNN1P51911 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNN1P51911 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNN1P51911 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNN1P51911 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CNN1P51911 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.74■□□□□ 0.91
CNN1P51911 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms