Protein–RNA interactions for Protein: P09936

UCHL1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL1P09936 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
UCHL1P09936 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UCHL1P09936 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
UCHL1P09936 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
UCHL1P09936 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
UCHL1P09936 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UCHL1P09936 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UCHL1P09936 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UCHL1P09936 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UCHL1P09936 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
UCHL1P09936 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UCHL1P09936 AC139426.1-201ENST00000568218 2529 ntBASIC23.77■■□□□ 1.4
UCHL1P09936 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UCHL1P09936 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UCHL1P09936 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.75■■□□□ 1.39
UCHL1P09936 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UCHL1P09936 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
UCHL1P09936 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UCHL1P09936 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UCHL1P09936 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UCHL1P09936 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.72■■□□□ 1.39
UCHL1P09936 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UCHL1P09936 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
UCHL1P09936 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
UCHL1P09936 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
UCHL1P09936 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
UCHL1P09936 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.7■■□□□ 1.38
UCHL1P09936 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
UCHL1P09936 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
UCHL1P09936 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.69■■□□□ 1.38
UCHL1P09936 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UCHL1P09936 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
UCHL1P09936 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UCHL1P09936 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
UCHL1P09936 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.66■■□□□ 1.38
UCHL1P09936 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UCHL1P09936 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UCHL1P09936 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
UCHL1P09936 ST7-AS1-201ENST00000456775 1889 ntBASIC23.64■■□□□ 1.37
UCHL1P09936 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
UCHL1P09936 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
UCHL1P09936 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UCHL1P09936 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.63■■□□□ 1.37
UCHL1P09936 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UCHL1P09936 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
UCHL1P09936 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UCHL1P09936 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
UCHL1P09936 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UCHL1P09936 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
UCHL1P09936 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UCHL1P09936 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UCHL1P09936 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
UCHL1P09936 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.57■■□□□ 1.36
UCHL1P09936 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UCHL1P09936 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UCHL1P09936 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
UCHL1P09936 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
UCHL1P09936 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.54■■□□□ 1.36
UCHL1P09936 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UCHL1P09936 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UCHL1P09936 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
UCHL1P09936 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.53■■□□□ 1.36
UCHL1P09936 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.53■■□□□ 1.36
UCHL1P09936 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
UCHL1P09936 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
UCHL1P09936 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
UCHL1P09936 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
UCHL1P09936 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
UCHL1P09936 AL161658.1-201ENST00000623641 1967 ntBASIC23.51■■□□□ 1.35
UCHL1P09936 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
UCHL1P09936 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UCHL1P09936 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.49■■□□□ 1.35
UCHL1P09936 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.48■■□□□ 1.35
UCHL1P09936 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
UCHL1P09936 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
UCHL1P09936 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.47■■□□□ 1.35
UCHL1P09936 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UCHL1P09936 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.46■■□□□ 1.35
UCHL1P09936 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
UCHL1P09936 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
UCHL1P09936 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
UCHL1P09936 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
UCHL1P09936 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
UCHL1P09936 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
UCHL1P09936 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
UCHL1P09936 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
UCHL1P09936 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.42■■□□□ 1.34
UCHL1P09936 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
UCHL1P09936 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
UCHL1P09936 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
UCHL1P09936 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
UCHL1P09936 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
UCHL1P09936 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
UCHL1P09936 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
UCHL1P09936 AC006077.2-201ENST00000623591 457 ntBASIC23.41■■□□□ 1.34
UCHL1P09936 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.4■■□□□ 1.34
UCHL1P09936 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
UCHL1P09936 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.39■■□□□ 1.34
UCHL1P09936 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.39■■□□□ 1.33
UCHL1P09936 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms