Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
HMGCRP04035 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
HMGCRP04035 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.35■■■□□ 2.61
HMGCRP04035 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
HMGCRP04035 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.33■■■□□ 2.61
HMGCRP04035 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
HMGCRP04035 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
HMGCRP04035 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.3■■■□□ 2.6
HMGCRP04035 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
HMGCRP04035 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
HMGCRP04035 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
HMGCRP04035 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
HMGCRP04035 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.28■■■□□ 2.6
HMGCRP04035 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
HMGCRP04035 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
HMGCRP04035 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
HMGCRP04035 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.26■■■□□ 2.59
HMGCRP04035 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
HMGCRP04035 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
HMGCRP04035 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HMGCRP04035 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.25■■■□□ 2.59
HMGCRP04035 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.25■■■□□ 2.59
HMGCRP04035 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HMGCRP04035 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.24■■■□□ 2.59
HMGCRP04035 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HMGCRP04035 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.23■■■□□ 2.59
HMGCRP04035 WASH5P-204ENST00000632292 975 ntBASIC31.22■■■□□ 2.59
HMGCRP04035 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGCRP04035 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGCRP04035 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.21■■■□□ 2.59
HMGCRP04035 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.2■■■□□ 2.59
HMGCRP04035 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.19■■■□□ 2.58
HMGCRP04035 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
HMGCRP04035 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGCRP04035 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
HMGCRP04035 DUX4L29-201ENST00000425409 679 ntBASIC31.18■■■□□ 2.58
HMGCRP04035 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HMGCRP04035 MIR4449-201ENST00000578365 66 ntBASIC31.17■■■□□ 2.58
HMGCRP04035 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
HMGCRP04035 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
HMGCRP04035 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGCRP04035 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
HMGCRP04035 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.11■■■□□ 2.57
HMGCRP04035 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HMGCRP04035 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
HMGCRP04035 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HMGCRP04035 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HMGCRP04035 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
HMGCRP04035 MIR639-201ENST00000384974 98 ntBASIC31.07■■■□□ 2.56
HMGCRP04035 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.06■■■□□ 2.56
HMGCRP04035 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.06■■■□□ 2.56
HMGCRP04035 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HMGCRP04035 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HMGCRP04035 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HMGCRP04035 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HMGCRP04035 AC021231.2-201ENST00000594613 730 ntBASIC31.02■■■□□ 2.56
HMGCRP04035 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31■■■□□ 2.55
HMGCRP04035 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31■■■□□ 2.55
HMGCRP04035 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
HMGCRP04035 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.98■■■□□ 2.55
HMGCRP04035 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.96■■■□□ 2.55
HMGCRP04035 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
HMGCRP04035 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
HMGCRP04035 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
HMGCRP04035 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.95■■■□□ 2.55
HMGCRP04035 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.93■■■□□ 2.54
HMGCRP04035 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
HMGCRP04035 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGCRP04035 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGCRP04035 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HMGCRP04035 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.9■■■□□ 2.54
HMGCRP04035 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HMGCRP04035 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HMGCRP04035 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
HMGCRP04035 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.89■■■□□ 2.54
HMGCRP04035 MIR3648-2-201ENST00000581792 180 ntBASIC30.88■■■□□ 2.53
HMGCRP04035 MIR3648-1-201ENST00000615959 180 ntBASIC30.88■■■□□ 2.53
HMGCRP04035 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.88■■■□□ 2.53
HMGCRP04035 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HMGCRP04035 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.86■■■□□ 2.53
HMGCRP04035 AC016575.1-201ENST00000607026 382 ntBASIC30.86■■■□□ 2.53
HMGCRP04035 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMGCRP04035 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMGCRP04035 HSD17B1P1-201ENST00000590052 955 ntBASIC30.85■■■□□ 2.53
HMGCRP04035 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.85■■■□□ 2.53
HMGCRP04035 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGCRP04035 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGCRP04035 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HMGCRP04035 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
HMGCRP04035 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.8■■■□□ 2.52
HMGCRP04035 AC108673.1-201ENST00000510422 1159 ntBASIC30.8■■■□□ 2.52
HMGCRP04035 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.8■■■□□ 2.52
HMGCRP04035 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGCRP04035 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.78■■■□□ 2.52
HMGCRP04035 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
HMGCRP04035 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HMGCRP04035 MIR6090-201ENST00000622481 60 ntBASIC30.76■■■□□ 2.51
HMGCRP04035 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.75■■■□□ 2.51
HMGCRP04035 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.75■■■□□ 2.51
HMGCRP04035 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms