Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP1R3DO95685 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP1R3DO95685 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP1R3DO95685 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PPP1R3DO95685 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.45■■□□□ 1.51
PPP1R3DO95685 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PPP1R3DO95685 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
PPP1R3DO95685 AP002365.1-201ENST00000603448 772 ntBASIC24.44■■□□□ 1.5
PPP1R3DO95685 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP1R3DO95685 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP1R3DO95685 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP1R3DO95685 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP1R3DO95685 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PPP1R3DO95685 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP1R3DO95685 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PPP1R3DO95685 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PPP1R3DO95685 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PPP1R3DO95685 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP1R3DO95685 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PPP1R3DO95685 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.36■■□□□ 1.49
PPP1R3DO95685 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PPP1R3DO95685 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP1R3DO95685 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP1R3DO95685 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
PPP1R3DO95685 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPP1R3DO95685 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
PPP1R3DO95685 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PPP1R3DO95685 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PPP1R3DO95685 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP1R3DO95685 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PPP1R3DO95685 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP1R3DO95685 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PPP1R3DO95685 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP1R3DO95685 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
PPP1R3DO95685 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP1R3DO95685 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP1R3DO95685 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP1R3DO95685 AL161658.1-201ENST00000623641 1967 ntBASIC24.29■■□□□ 1.48
PPP1R3DO95685 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP1R3DO95685 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP1R3DO95685 ABCB10P3-201ENST00000561950 2166 ntBASIC24.28■■□□□ 1.48
PPP1R3DO95685 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP1R3DO95685 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP1R3DO95685 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP1R3DO95685 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
PPP1R3DO95685 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP1R3DO95685 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP1R3DO95685 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP1R3DO95685 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.26■■□□□ 1.47
PPP1R3DO95685 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP1R3DO95685 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP1R3DO95685 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPP1R3DO95685 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PPP1R3DO95685 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
PPP1R3DO95685 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.24■■□□□ 1.47
PPP1R3DO95685 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP1R3DO95685 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPP1R3DO95685 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP1R3DO95685 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PPP1R3DO95685 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPP1R3DO95685 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPP1R3DO95685 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PPP1R3DO95685 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PPP1R3DO95685 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PPP1R3DO95685 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.2■■□□□ 1.46
PPP1R3DO95685 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PPP1R3DO95685 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.19■■□□□ 1.46
PPP1R3DO95685 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
PPP1R3DO95685 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PPP1R3DO95685 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.18■■□□□ 1.46
PPP1R3DO95685 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PPP1R3DO95685 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.17■■□□□ 1.46
PPP1R3DO95685 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.17■■□□□ 1.46
PPP1R3DO95685 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PPP1R3DO95685 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PPP1R3DO95685 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PPP1R3DO95685 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP1R3DO95685 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PPP1R3DO95685 ST7-AS1-201ENST00000456775 1889 ntBASIC24.15■■□□□ 1.46
PPP1R3DO95685 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP1R3DO95685 AC139426.1-201ENST00000568218 2529 ntBASIC24.15■■□□□ 1.46
PPP1R3DO95685 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PPP1R3DO95685 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PPP1R3DO95685 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PPP1R3DO95685 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PPP1R3DO95685 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP1R3DO95685 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP1R3DO95685 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP1R3DO95685 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.12■■□□□ 1.45
PPP1R3DO95685 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PPP1R3DO95685 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PPP1R3DO95685 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PPP1R3DO95685 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PPP1R3DO95685 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP1R3DO95685 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PPP1R3DO95685 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PPP1R3DO95685 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PPP1R3DO95685 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.08■■□□□ 1.45
PPP1R3DO95685 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PPP1R3DO95685 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms