Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
TRIM6-TRIM34B2RNG4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
TRIM6-TRIM34B2RNG4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
TRIM6-TRIM34B2RNG4 RARRES2P7-201ENST00000567349 469 ntBASIC33.16■■■□□ 2.9
TRIM6-TRIM34B2RNG4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM6-TRIM34B2RNG4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM6-TRIM34B2RNG4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM6-TRIM34B2RNG4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
TRIM6-TRIM34B2RNG4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM6-TRIM34B2RNG4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.11■■■□□ 2.89
TRIM6-TRIM34B2RNG4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
TRIM6-TRIM34B2RNG4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.09■■■□□ 2.89
TRIM6-TRIM34B2RNG4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
TRIM6-TRIM34B2RNG4 AL133380.1-201ENST00000506013 324 ntBASIC33.08■■■□□ 2.89
TRIM6-TRIM34B2RNG4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
TRIM6-TRIM34B2RNG4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.07■■■□□ 2.88
TRIM6-TRIM34B2RNG4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
TRIM6-TRIM34B2RNG4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
TRIM6-TRIM34B2RNG4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
TRIM6-TRIM34B2RNG4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.03■■■□□ 2.88
TRIM6-TRIM34B2RNG4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
TRIM6-TRIM34B2RNG4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.01■■■□□ 2.87
TRIM6-TRIM34B2RNG4 SETD8P1-201ENST00000623146 1180 ntBASIC33.01■■■□□ 2.87
TRIM6-TRIM34B2RNG4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TRIM6-TRIM34B2RNG4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TRIM6-TRIM34B2RNG4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
TRIM6-TRIM34B2RNG4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.97■■■□□ 2.87
TRIM6-TRIM34B2RNG4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TRIM6-TRIM34B2RNG4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.96■■■□□ 2.87
TRIM6-TRIM34B2RNG4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.94■■■□□ 2.86
TRIM6-TRIM34B2RNG4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
TRIM6-TRIM34B2RNG4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
TRIM6-TRIM34B2RNG4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
TRIM6-TRIM34B2RNG4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
TRIM6-TRIM34B2RNG4 AL161658.1-201ENST00000623641 1967 ntBASIC32.9■■■□□ 2.86
TRIM6-TRIM34B2RNG4 WASH5P-204ENST00000632292 975 ntBASIC32.9■■■□□ 2.86
TRIM6-TRIM34B2RNG4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.89■■■□□ 2.86
TRIM6-TRIM34B2RNG4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
TRIM6-TRIM34B2RNG4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
TRIM6-TRIM34B2RNG4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
TRIM6-TRIM34B2RNG4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.85■■■□□ 2.85
TRIM6-TRIM34B2RNG4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
TRIM6-TRIM34B2RNG4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
TRIM6-TRIM34B2RNG4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.84■■■□□ 2.85
TRIM6-TRIM34B2RNG4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
TRIM6-TRIM34B2RNG4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM6-TRIM34B2RNG4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRIM6-TRIM34B2RNG4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
TRIM6-TRIM34B2RNG4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
TRIM6-TRIM34B2RNG4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
TRIM6-TRIM34B2RNG4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
TRIM6-TRIM34B2RNG4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.8■■■□□ 2.84
TRIM6-TRIM34B2RNG4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM6-TRIM34B2RNG4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.79■■■□□ 2.84
TRIM6-TRIM34B2RNG4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
TRIM6-TRIM34B2RNG4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM6-TRIM34B2RNG4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
TRIM6-TRIM34B2RNG4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM6-TRIM34B2RNG4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM6-TRIM34B2RNG4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.75■■■□□ 2.83
TRIM6-TRIM34B2RNG4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM6-TRIM34B2RNG4 AC097358.2-201ENST00000607541 1159 ntBASIC32.74■■■□□ 2.83
TRIM6-TRIM34B2RNG4 AC136428.2-201ENST00000563187 214 ntBASIC32.73■■■□□ 2.83
TRIM6-TRIM34B2RNG4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
TRIM6-TRIM34B2RNG4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TRIM6-TRIM34B2RNG4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
TRIM6-TRIM34B2RNG4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
TRIM6-TRIM34B2RNG4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.7■■■□□ 2.83
TRIM6-TRIM34B2RNG4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
TRIM6-TRIM34B2RNG4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.7■■■□□ 2.83
TRIM6-TRIM34B2RNG4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
TRIM6-TRIM34B2RNG4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TRIM6-TRIM34B2RNG4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TRIM6-TRIM34B2RNG4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
TRIM6-TRIM34B2RNG4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
TRIM6-TRIM34B2RNG4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.67■■■□□ 2.82
TRIM6-TRIM34B2RNG4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
TRIM6-TRIM34B2RNG4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
TRIM6-TRIM34B2RNG4 ABCB10P1-201ENST00000614297 2181 ntBASIC32.66■■■□□ 2.82
TRIM6-TRIM34B2RNG4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
TRIM6-TRIM34B2RNG4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
TRIM6-TRIM34B2RNG4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
TRIM6-TRIM34B2RNG4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
TRIM6-TRIM34B2RNG4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
TRIM6-TRIM34B2RNG4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.63■■■□□ 2.81
TRIM6-TRIM34B2RNG4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.63■■■□□ 2.81
TRIM6-TRIM34B2RNG4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.62■■■□□ 2.81
TRIM6-TRIM34B2RNG4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
TRIM6-TRIM34B2RNG4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
TRIM6-TRIM34B2RNG4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.61■■■□□ 2.81
TRIM6-TRIM34B2RNG4 CAHM-201ENST00000604200 896 ntBASIC32.61■■■□□ 2.81
TRIM6-TRIM34B2RNG4 AL391121.1-201ENST00000607967 1349 ntBASIC32.6■■■□□ 2.81
TRIM6-TRIM34B2RNG4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.6■■■□□ 2.81
TRIM6-TRIM34B2RNG4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
TRIM6-TRIM34B2RNG4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
TRIM6-TRIM34B2RNG4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM6-TRIM34B2RNG4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM6-TRIM34B2RNG4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.58■■■□□ 2.81
TRIM6-TRIM34B2RNG4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.81
TRIM6-TRIM34B2RNG4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms