Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
ZSWIM8A7E2V4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ZSWIM8A7E2V4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.75■■■□□ 2.67
ZSWIM8A7E2V4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
ZSWIM8A7E2V4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
ZSWIM8A7E2V4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.73■■■□□ 2.67
ZSWIM8A7E2V4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.73■■■□□ 2.67
ZSWIM8A7E2V4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.73■■■□□ 2.67
ZSWIM8A7E2V4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.73■■■□□ 2.67
ZSWIM8A7E2V4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ZSWIM8A7E2V4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
ZSWIM8A7E2V4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZSWIM8A7E2V4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZSWIM8A7E2V4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.7■■■□□ 2.67
ZSWIM8A7E2V4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.7■■■□□ 2.67
ZSWIM8A7E2V4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
ZSWIM8A7E2V4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZSWIM8A7E2V4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZSWIM8A7E2V4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZSWIM8A7E2V4 MIR4449-201ENST00000578365 66 ntBASIC31.63■■■□□ 2.65
ZSWIM8A7E2V4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ZSWIM8A7E2V4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ZSWIM8A7E2V4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ZSWIM8A7E2V4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZSWIM8A7E2V4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZSWIM8A7E2V4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.58■■■□□ 2.65
ZSWIM8A7E2V4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.58■■■□□ 2.65
ZSWIM8A7E2V4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
ZSWIM8A7E2V4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.57■■■□□ 2.64
ZSWIM8A7E2V4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.56■■■□□ 2.64
ZSWIM8A7E2V4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZSWIM8A7E2V4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZSWIM8A7E2V4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZSWIM8A7E2V4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZSWIM8A7E2V4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 WASH5P-204ENST00000632292 975 ntBASIC31.52■■■□□ 2.64
ZSWIM8A7E2V4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZSWIM8A7E2V4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZSWIM8A7E2V4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZSWIM8A7E2V4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZSWIM8A7E2V4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.47■■■□□ 2.63
ZSWIM8A7E2V4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ZSWIM8A7E2V4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ZSWIM8A7E2V4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZSWIM8A7E2V4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZSWIM8A7E2V4 DUX4L29-201ENST00000425409 679 ntBASIC31.45■■■□□ 2.63
ZSWIM8A7E2V4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.43■■■□□ 2.62
ZSWIM8A7E2V4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZSWIM8A7E2V4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ZSWIM8A7E2V4 MIR639-201ENST00000384974 98 ntBASIC31.42■■■□□ 2.62
ZSWIM8A7E2V4 HSD17B1P1-201ENST00000590052 955 ntBASIC31.42■■■□□ 2.62
ZSWIM8A7E2V4 AC016575.1-201ENST00000607026 382 ntBASIC31.42■■■□□ 2.62
ZSWIM8A7E2V4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZSWIM8A7E2V4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.4■■■□□ 2.62
ZSWIM8A7E2V4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.4■■■□□ 2.62
ZSWIM8A7E2V4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ZSWIM8A7E2V4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.38■■■□□ 2.61
ZSWIM8A7E2V4 AC021231.2-201ENST00000594613 730 ntBASIC31.38■■■□□ 2.61
ZSWIM8A7E2V4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZSWIM8A7E2V4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.36■■■□□ 2.61
ZSWIM8A7E2V4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.36■■■□□ 2.61
ZSWIM8A7E2V4 CR559946.2-201ENST00000623684 991 ntBASIC31.35■■■□□ 2.61
ZSWIM8A7E2V4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZSWIM8A7E2V4 MIR3648-2-201ENST00000581792 180 ntBASIC31.33■■■□□ 2.61
ZSWIM8A7E2V4 MIR3648-1-201ENST00000615959 180 ntBASIC31.33■■■□□ 2.61
ZSWIM8A7E2V4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZSWIM8A7E2V4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZSWIM8A7E2V4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZSWIM8A7E2V4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.31■■■□□ 2.6
ZSWIM8A7E2V4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
ZSWIM8A7E2V4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
ZSWIM8A7E2V4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZSWIM8A7E2V4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.28■■■□□ 2.6
ZSWIM8A7E2V4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.28■■■□□ 2.6
ZSWIM8A7E2V4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZSWIM8A7E2V4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZSWIM8A7E2V4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
ZSWIM8A7E2V4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.6
ZSWIM8A7E2V4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZSWIM8A7E2V4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.25■■■□□ 2.59
ZSWIM8A7E2V4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZSWIM8A7E2V4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.25■■■□□ 2.59
ZSWIM8A7E2V4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZSWIM8A7E2V4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZSWIM8A7E2V4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
ZSWIM8A7E2V4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.24■■■□□ 2.59
ZSWIM8A7E2V4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.21■■■□□ 2.59
ZSWIM8A7E2V4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ZSWIM8A7E2V4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.2■■■□□ 2.59
ZSWIM8A7E2V4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ZSWIM8A7E2V4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ZSWIM8A7E2V4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZSWIM8A7E2V4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.17■■■□□ 2.58
ZSWIM8A7E2V4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ZSWIM8A7E2V4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.16■■■□□ 2.58
ZSWIM8A7E2V4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms