Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC40.83■■■■■ 4.13
HFM1A2PYH4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC40.82■■■■■ 4.13
HFM1A2PYH4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC40.82■■■■■ 4.12
HFM1A2PYH4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
HFM1A2PYH4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
HFM1A2PYH4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
HFM1A2PYH4 HNRNPLP2-201ENST00000568980 1570 ntBASIC40.79■■■■■ 4.12
HFM1A2PYH4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC40.78■■■■■ 4.12
HFM1A2PYH4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
HFM1A2PYH4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC40.77■■■■■ 4.12
HFM1A2PYH4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
HFM1A2PYH4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC40.72■■■■■ 4.11
HFM1A2PYH4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC40.71■■■■■ 4.11
HFM1A2PYH4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC40.7■■■■■ 4.11
HFM1A2PYH4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
HFM1A2PYH4 AL162393.1-201ENST00000437852 946 ntBASIC40.67■■■■■ 4.1
HFM1A2PYH4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
HFM1A2PYH4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
HFM1A2PYH4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.63■■■■■ 4.09
HFM1A2PYH4 AP006261.1-201ENST00000584783 668 ntBASIC40.62■■■■■ 4.09
HFM1A2PYH4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
HFM1A2PYH4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC40.6■■■■■ 4.09
HFM1A2PYH4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
HFM1A2PYH4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC40.58■■■■■ 4.09
HFM1A2PYH4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
HFM1A2PYH4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
HFM1A2PYH4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC40.55■■■■■ 4.08
HFM1A2PYH4 MIR762-201ENST00000390236 83 ntBASIC40.55■■■■■ 4.08
HFM1A2PYH4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC40.53■■■■■ 4.08
HFM1A2PYH4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
HFM1A2PYH4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.53■■■■■ 4.08
HFM1A2PYH4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
HFM1A2PYH4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
HFM1A2PYH4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC40.51■■■■■ 4.08
HFM1A2PYH4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.51■■■■■ 4.08
HFM1A2PYH4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
HFM1A2PYH4 CHML-205ENST00000638160 705 ntTSL 3 BASIC40.5■■■■■ 4.07
HFM1A2PYH4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC40.49■■■■■ 4.07
HFM1A2PYH4 DUX4L28-201ENST00000623687 678 ntBASIC40.49■■■■■ 4.07
HFM1A2PYH4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 RPS2P35-201ENST00000443417 897 ntBASIC40.47■■■■■ 4.07
HFM1A2PYH4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
HFM1A2PYH4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC40.46■■■■■ 4.07
HFM1A2PYH4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC40.46■■■■■ 4.07
HFM1A2PYH4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
HFM1A2PYH4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC40.43■■■■■ 4.06
HFM1A2PYH4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
HFM1A2PYH4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
HFM1A2PYH4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC40.4■■■■■ 4.06
HFM1A2PYH4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
HFM1A2PYH4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
HFM1A2PYH4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC40.35■■■■■ 4.05
HFM1A2PYH4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
HFM1A2PYH4 AC005559.1-201ENST00000589661 871 ntBASIC40.35■■■■■ 4.05
HFM1A2PYH4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC40.35■■■■■ 4.05
HFM1A2PYH4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
HFM1A2PYH4 MIR3665-201ENST00000578708 105 ntBASIC40.34■■■■■ 4.05
HFM1A2PYH4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC40.32■■■■■ 4.04
HFM1A2PYH4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
HFM1A2PYH4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC40.28■■■■■ 4.04
HFM1A2PYH4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC40.28■■■■■ 4.04
HFM1A2PYH4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
HFM1A2PYH4 AC087741.3-201ENST00000624270 1347 ntBASIC40.28■■■■■ 4.04
HFM1A2PYH4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
HFM1A2PYH4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
HFM1A2PYH4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
HFM1A2PYH4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC40.24■■■■■ 4.03
HFM1A2PYH4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
HFM1A2PYH4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC40.23■■■■■ 4.03
HFM1A2PYH4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
HFM1A2PYH4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
HFM1A2PYH4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
HFM1A2PYH4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
HFM1A2PYH4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC40.19■■■■■ 4.02
HFM1A2PYH4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
HFM1A2PYH4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
HFM1A2PYH4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC40.14■■■■■ 4.02
HFM1A2PYH4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC40.13■■■■■ 4.01
HFM1A2PYH4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
HFM1A2PYH4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC40.11■■■■■ 4.01
HFM1A2PYH4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
HFM1A2PYH4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC40.1■■■■■ 4.01
HFM1A2PYH4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.1■■■■■ 4.01
HFM1A2PYH4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC40.08■■■■■ 4.01
HFM1A2PYH4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
HFM1A2PYH4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC40.07■■■■■ 4
HFM1A2PYH4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.06■■■■■ 4
HFM1A2PYH4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.05■■■■■ 4
HFM1A2PYH4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.05■■■■■ 4
HFM1A2PYH4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC40.05■■■■■ 4
HFM1A2PYH4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC40.05■■■■■ 4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms