Protein–RNA interactions for Protein: A0A0A6YYH1

C15orf38-AP3S2, Protein C15orf38-AP3S2, humanhuman

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf38-AP3S2A0A0A6YYH1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.14■■□□□ 1.78
C15orf38-AP3S2A0A0A6YYH1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.12■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.11■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.1■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
C15orf38-AP3S2A0A0A6YYH1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.06■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.03■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.02■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
C15orf38-AP3S2A0A0A6YYH1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 AL031258.1-201ENST00000623562 325 ntBASIC26.01■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
C15orf38-AP3S2A0A0A6YYH1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.94■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.93■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.89■■□□□ 1.74
C15orf38-AP3S2A0A0A6YYH1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.87■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.84■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.84■■□□□ 1.73
C15orf38-AP3S2A0A0A6YYH1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.78■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.77■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.77■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
C15orf38-AP3S2A0A0A6YYH1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.72■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.72■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
C15orf38-AP3S2A0A0A6YYH1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.7■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.68■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.67■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
C15orf38-AP3S2A0A0A6YYH1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
C15orf38-AP3S2A0A0A6YYH1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms