Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRBV19A0A075B6N1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV19A0A075B6N1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV19A0A075B6N1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV19A0A075B6N1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV19A0A075B6N1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV19A0A075B6N1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV19A0A075B6N1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV19A0A075B6N1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV19A0A075B6N1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV19A0A075B6N1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV19A0A075B6N1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV19A0A075B6N1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBV19A0A075B6N1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV19A0A075B6N1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV19A0A075B6N1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV19A0A075B6N1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRBV19A0A075B6N1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV19A0A075B6N1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV19A0A075B6N1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
TRBV19A0A075B6N1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV19A0A075B6N1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV19A0A075B6N1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV19A0A075B6N1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV19A0A075B6N1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV19A0A075B6N1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV19A0A075B6N1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV19A0A075B6N1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV19A0A075B6N1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV19A0A075B6N1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV19A0A075B6N1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV19A0A075B6N1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV19A0A075B6N1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV19A0A075B6N1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV19A0A075B6N1 DYNLL1-208ENST00000550178 581 ntBASIC20.56■□□□□ 0.88
TRBV19A0A075B6N1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV19A0A075B6N1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV19A0A075B6N1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV19A0A075B6N1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV19A0A075B6N1 AC139426.1-201ENST00000568218 2529 ntBASIC20.54■□□□□ 0.88
TRBV19A0A075B6N1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV19A0A075B6N1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV19A0A075B6N1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBV19A0A075B6N1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV19A0A075B6N1 ST7-AS1-201ENST00000456775 1889 ntBASIC20.53■□□□□ 0.88
TRBV19A0A075B6N1 AL161658.1-201ENST00000623641 1967 ntBASIC20.52■□□□□ 0.88
TRBV19A0A075B6N1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV19A0A075B6N1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBV19A0A075B6N1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRBV19A0A075B6N1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV19A0A075B6N1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV19A0A075B6N1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRBV19A0A075B6N1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRBV19A0A075B6N1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV19A0A075B6N1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TRBV19A0A075B6N1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRBV19A0A075B6N1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
TRBV19A0A075B6N1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRBV19A0A075B6N1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV19A0A075B6N1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRBV19A0A075B6N1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV19A0A075B6N1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV19A0A075B6N1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRBV19A0A075B6N1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRBV19A0A075B6N1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV19A0A075B6N1 AL031258.1-201ENST00000623562 325 ntBASIC20.43■□□□□ 0.86
TRBV19A0A075B6N1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV19A0A075B6N1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV19A0A075B6N1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV19A0A075B6N1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV19A0A075B6N1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
TRBV19A0A075B6N1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV19A0A075B6N1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.4■□□□□ 0.86
TRBV19A0A075B6N1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV19A0A075B6N1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV19A0A075B6N1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV19A0A075B6N1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV19A0A075B6N1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV19A0A075B6N1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV19A0A075B6N1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV19A0A075B6N1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRBV19A0A075B6N1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV19A0A075B6N1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV19A0A075B6N1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV19A0A075B6N1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms