Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.59■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 AL162393.1-201ENST00000437852 946 ntBASIC26.59■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.59■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.59■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.58■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRBV23OR9-2A0A075B6M9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 MIR762-201ENST00000390236 83 ntBASIC26.54■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 AP006261.1-201ENST00000584783 668 ntBASIC26.53■■□□□ 1.84
TRBV23OR9-2A0A075B6M9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.51■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.49■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.49■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.47■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRBV23OR9-2A0A075B6M9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 MIR3665-201ENST00000578708 105 ntBASIC26.45■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 DUX4L28-201ENST00000623687 678 ntBASIC26.44■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 AC005559.1-201ENST00000589661 871 ntBASIC26.43■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.42■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRBV23OR9-2A0A075B6M9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 AC120057.4-201ENST00000624722 1615 ntBASIC26.38■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.37■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.36■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.36■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 AC087741.3-201ENST00000624270 1347 ntBASIC26.35■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.34■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.33■■□□□ 1.81
TRBV23OR9-2A0A075B6M9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.3■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.27■■□□□ 1.8
TRBV23OR9-2A0A075B6M9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.23■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRBV23OR9-2A0A075B6M9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.2■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.2■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 AC044849.2-201ENST00000606596 710 ntBASIC26.2■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.17■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRBV23OR9-2A0A075B6M9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.13■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.13■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.11■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.11■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRBV23OR9-2A0A075B6M9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms