Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 TYRL-201ENST00000243152 441 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 COX17-201ENST00000261070 684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AL355994.4-201ENST00000416882 563 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 PHKG1P4-201ENST00000430144 370 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 HTATSF1P1-201ENST00000432008 984 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC093367.1-201ENST00000517332 420 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 RPSAP71-201ENST00000522496 872 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 MIR3194-201ENST00000582236 73 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC104440.1-201ENST00000605010 343 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC113385.3-201ENST00000621479 747 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 AC018445.4-201ENST00000624066 2291 ntBASIC12.34□□□□□ -0.43
NCDNQ9UBB6 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC12.34□□□□□ -0.43
NCDNQ9UBB6 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
NCDNQ9UBB6 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 S100A1-203ENST00000368698 784 ntTSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 SNORA9B-201ENST00000384170 133 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 HLA-DQB1-203ENST00000399082 1219 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 KRT18P50-201ENST00000404337 1243 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 CST13P-203ENST00000413633 1152 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AC011995.1-201ENST00000437610 578 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AL121658.1-201ENST00000608489 712 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 CBR3-AS1-205ENST00000608622 586 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AC091941.1-201ENST00000623003 576 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AC003101.3-201ENST00000624452 768 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 AL645937.6-201ENST00000641122 3727 ntBASIC12.33□□□□□ -0.44
NCDNQ9UBB6 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.33□□□□□ -0.44
NCDNQ9UBB6 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms