RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.43
SOX30-203ENST00000519442 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
SOX30-203ENST00000519442 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
SOX30-203ENST00000519442 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
SOX30-203ENST00000519442 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
SOX30-203ENST00000519442 ABCC9O60706 1549 aa24.95■■□□□ 1.58
SOX30-203ENST00000519442 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
SOX30-203ENST00000519442 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
SOX30-203ENST00000519442 NACADO15069 1562 aa24.55■■□□□ 1.52
SOX30-203ENST00000519442 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
SOX30-203ENST00000519442 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
SOX30-203ENST00000519442 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
SOX30-203ENST00000519442 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
SOX30-203ENST00000519442 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
SOX30-203ENST00000519442 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.36
SOX30-203ENST00000519442 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
SOX30-203ENST00000519442 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
SOX30-203ENST00000519442 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
SOX30-203ENST00000519442 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
SOX30-203ENST00000519442 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
SOX30-203ENST00000519442 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
SOX30-203ENST00000519442 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
SOX30-203ENST00000519442 WIZO95785 1651 aa23.13■■□□□ 1.29
SOX30-203ENST00000519442 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
SOX30-203ENST00000519442 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
SOX30-203ENST00000519442 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
SOX30-203ENST00000519442 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
SOX30-203ENST00000519442 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
SOX30-203ENST00000519442 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
SOX30-203ENST00000519442 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
SOX30-203ENST00000519442 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
SOX30-203ENST00000519442 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
SOX30-203ENST00000519442 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
SOX30-203ENST00000519442 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
SOX30-203ENST00000519442 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
SOX30-203ENST00000519442 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
SOX30-203ENST00000519442 CFTRP13569 1480 aa22.16■■□□□ 1.14
SOX30-203ENST00000519442 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
SOX30-203ENST00000519442 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
SOX30-203ENST00000519442 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
SOX30-203ENST00000519442 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
SOX30-203ENST00000519442 FAM9AQ8IZU1 332 aaPredicted RBP21.91■■□□□ 1.1
SOX30-203ENST00000519442 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.1
SOX30-203ENST00000519442 NESP48681 1621 aa21.88■■□□□ 1.09
SOX30-203ENST00000519442 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
SOX30-203ENST00000519442 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
SOX30-203ENST00000519442 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
SOX30-203ENST00000519442 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
SOX30-203ENST00000519442 CUX1P39880 1505 aa21.82■■□□□ 1.08
SOX30-203ENST00000519442 SOGA1O94964 1423 aa21.79■■□□□ 1.08
SOX30-203ENST00000519442 EEA1Q15075 1411 aa21.77■■□□□ 1.08
SOX30-203ENST00000519442 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
SOX30-203ENST00000519442 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
SOX30-203ENST00000519442 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
SOX30-203ENST00000519442 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
SOX30-203ENST00000519442 DNMBPQ6XZF7 1577 aa21.64■■□□□ 1.05
SOX30-203ENST00000519442 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
SOX30-203ENST00000519442 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
SOX30-203ENST00000519442 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
SOX30-203ENST00000519442 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
SOX30-203ENST00000519442 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
SOX30-203ENST00000519442 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
SOX30-203ENST00000519442 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
SOX30-203ENST00000519442 CUX2O14529 1486 aa21.47■■□□□ 1.03
SOX30-203ENST00000519442 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
SOX30-203ENST00000519442 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
SOX30-203ENST00000519442 KIF21BO75037 1637 aa21.45■■□□□ 1.02
SOX30-203ENST00000519442 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
SOX30-203ENST00000519442 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
SOX30-203ENST00000519442 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
SOX30-203ENST00000519442 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
SOX30-203ENST00000519442 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.01
SOX30-203ENST00000519442 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
SOX30-203ENST00000519442 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
SOX30-203ENST00000519442 WDR62O43379 1518 aa21.33■■□□□ 1.01
SOX30-203ENST00000519442 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
SOX30-203ENST00000519442 IGF1RP08069 1367 aa21.32■■□□□ 1
SOX30-203ENST00000519442 WDR97A6NE52 1622 aa21.3■■□□□ 1
SOX30-203ENST00000519442 CEP162Q5TB80 1403 aa21.27■■□□□ 1
SOX30-203ENST00000519442 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
SOX30-203ENST00000519442 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
SOX30-203ENST00000519442 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
SOX30-203ENST00000519442 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
SOX30-203ENST00000519442 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
SOX30-203ENST00000519442 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
SOX30-203ENST00000519442 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
SOX30-203ENST00000519442 CUL7Q14999 1698 aa21.15■□□□□ 0.98
SOX30-203ENST00000519442 CLIP1P30622 1438 aa21.12■□□□□ 0.97
SOX30-203ENST00000519442 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.97
SOX30-203ENST00000519442 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
SOX30-203ENST00000519442 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
SOX30-203ENST00000519442 PBRM1Q86U86 1689 aa21.04■□□□□ 0.96
SOX30-203ENST00000519442 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
SOX30-203ENST00000519442 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
SOX30-203ENST00000519442 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
SOX30-203ENST00000519442 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
SOX30-203ENST00000519442 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
SOX30-203ENST00000519442 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
SOX30-203ENST00000519442 ARAP1Q96P48 1450 aa20.89■□□□□ 0.93
SOX30-203ENST00000519442 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms