Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.05■□□□□ 0.8
THBS1P07996 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.05■□□□□ 0.8
THBS1P07996 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.05■□□□□ 0.8
THBS1P07996 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
THBS1P07996 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
THBS1P07996 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
THBS1P07996 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
THBS1P07996 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
THBS1P07996 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
THBS1P07996 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
THBS1P07996 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.03■□□□□ 0.8
THBS1P07996 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.03■□□□□ 0.8
THBS1P07996 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
THBS1P07996 AC131281.2-201ENST00000520478 145 ntBASIC20.03■□□□□ 0.8
THBS1P07996 DUX4L19-201ENST00000557448 1267 ntBASIC20.03■□□□□ 0.8
THBS1P07996 AL138724.1-201ENST00000606771 1088 ntBASIC20.03■□□□□ 0.8
THBS1P07996 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS1P07996 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.02■□□□□ 0.8
THBS1P07996 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THBS1P07996 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
THBS1P07996 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
THBS1P07996 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.02■□□□□ 0.8
THBS1P07996 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
THBS1P07996 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
THBS1P07996 CLDN5-201ENST00000403084 2357 ntBASIC20.02■□□□□ 0.8
THBS1P07996 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
THBS1P07996 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
THBS1P07996 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THBS1P07996 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THBS1P07996 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.02■□□□□ 0.79
THBS1P07996 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THBS1P07996 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 MIR638-201ENST00000385237 100 ntBASIC20.01■□□□□ 0.79
THBS1P07996 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 AC079089.2-201ENST00000531211 1277 ntBASIC20.01■□□□□ 0.79
THBS1P07996 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.01■□□□□ 0.79
THBS1P07996 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
THBS1P07996 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THBS1P07996 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
THBS1P07996 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20■□□□□ 0.79
THBS1P07996 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THBS1P07996 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20■□□□□ 0.79
THBS1P07996 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
THBS1P07996 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20■□□□□ 0.79
THBS1P07996 MIR4466-201ENST00000606121 54 ntBASIC20■□□□□ 0.79
THBS1P07996 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20■□□□□ 0.79
THBS1P07996 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20■□□□□ 0.79
THBS1P07996 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
THBS1P07996 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
THBS1P07996 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.99■□□□□ 0.79
THBS1P07996 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
THBS1P07996 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.99■□□□□ 0.79
THBS1P07996 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THBS1P07996 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.99■□□□□ 0.79
THBS1P07996 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms