Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL035420.3-201ENST00000619647 321 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 AC148477.9-201ENST00000623974 539 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PIAS3-203ENST00000393045 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 GNG12-AS1-203ENST00000420587 2232 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CAST-233ENST00000510756 2310 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CD83-202ENST00000612003 2307 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NEFL-201ENST00000610854 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC092117.2-201ENST00000623937 1659 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 APTX-203ENST00000379813 1121 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 MIR219A2-202ENST00000385220 97 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CDCA4P3-201ENST00000442572 689 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC009305.1-201ENST00000449780 368 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AL606834.1-201ENST00000553836 1169 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 IGHV3OR16-11-201ENST00000565524 349 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 AC138430.2-201ENST00000624068 504 ntBASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO3Q8TAP4 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 USP8-219ENST00000625664 1568 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 PTPRVP-205ENST00000641549 5067 ntBASIC13.28□□□□□ -0.28
LMO3Q8TAP4 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO3Q8TAP4 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms