RNA–Protein interactions for RNA: ENST00000448395.6

KNSTRN-203, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2 BASIC

Gene KNSTRN, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-203ENST00000448395 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
KNSTRN-203ENST00000448395 ABCC9O60706 1549 aa23.75■■□□□ 1.39
KNSTRN-203ENST00000448395 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
KNSTRN-203ENST00000448395 CCDC180Q9P1Z9 1646 aa23.2■■□□□ 1.3
KNSTRN-203ENST00000448395 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
KNSTRN-203ENST00000448395 DNAJC5Q9H3Z4 198 aa22.23■■□□□ 1.15
KNSTRN-203ENST00000448395 DCAF1Q9Y4B6 1507 aa22.19■■□□□ 1.14
KNSTRN-203ENST00000448395 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
KNSTRN-203ENST00000448395 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
KNSTRN-203ENST00000448395 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
KNSTRN-203ENST00000448395 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
KNSTRN-203ENST00000448395 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
KNSTRN-203ENST00000448395 NACADO15069 1562 aa21.73■■□□□ 1.07
KNSTRN-203ENST00000448395 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
KNSTRN-203ENST00000448395 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
KNSTRN-203ENST00000448395 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
KNSTRN-203ENST00000448395 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
KNSTRN-203ENST00000448395 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
KNSTRN-203ENST00000448395 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
KNSTRN-203ENST00000448395 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
KNSTRN-203ENST00000448395 CUX2O14529 1486 aa20.98■□□□□ 0.95
KNSTRN-203ENST00000448395 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
KNSTRN-203ENST00000448395 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
KNSTRN-203ENST00000448395 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
KNSTRN-203ENST00000448395 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
KNSTRN-203ENST00000448395 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
KNSTRN-203ENST00000448395 WIZO95785 1651 aa20.56■□□□□ 0.88
KNSTRN-203ENST00000448395 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
KNSTRN-203ENST00000448395 SMARCA4P51532 1647 aa20.52■□□□□ 0.87
KNSTRN-203ENST00000448395 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
KNSTRN-203ENST00000448395 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
KNSTRN-203ENST00000448395 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
KNSTRN-203ENST00000448395 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
KNSTRN-203ENST00000448395 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
KNSTRN-203ENST00000448395 NESP48681 1621 aa20.1■□□□□ 0.81
KNSTRN-203ENST00000448395 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
KNSTRN-203ENST00000448395 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
KNSTRN-203ENST00000448395 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
KNSTRN-203ENST00000448395 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
KNSTRN-203ENST00000448395 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
KNSTRN-203ENST00000448395 ABCC8Q09428 1581 aa19.83■□□□□ 0.77
KNSTRN-203ENST00000448395 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
KNSTRN-203ENST00000448395 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
KNSTRN-203ENST00000448395 OSCARQ8IYS5 282 aa19.77■□□□□ 0.76
KNSTRN-203ENST00000448395 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
KNSTRN-203ENST00000448395 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
KNSTRN-203ENST00000448395 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
KNSTRN-203ENST00000448395 RIMBP3CA6NJZ7 1639 aa19.68■□□□□ 0.74
KNSTRN-203ENST00000448395 RIMBP3BA6NNM3 1639 aa19.68■□□□□ 0.74
KNSTRN-203ENST00000448395 RIMBP3Q9UFD9 1639 aa19.68■□□□□ 0.74
KNSTRN-203ENST00000448395 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
KNSTRN-203ENST00000448395 EEA1Q15075 1411 aa19.63■□□□□ 0.73
KNSTRN-203ENST00000448395 WDR62O43379 1518 aa19.63■□□□□ 0.73
KNSTRN-203ENST00000448395 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
KNSTRN-203ENST00000448395 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
KNSTRN-203ENST00000448395 SOGA1O94964 1423 aa19.56■□□□□ 0.72
KNSTRN-203ENST00000448395 CFTRP13569 1480 aa19.52■□□□□ 0.71
KNSTRN-203ENST00000448395 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
KNSTRN-203ENST00000448395 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
KNSTRN-203ENST00000448395 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
KNSTRN-203ENST00000448395 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
KNSTRN-203ENST00000448395 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
KNSTRN-203ENST00000448395 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
KNSTRN-203ENST00000448395 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
KNSTRN-203ENST00000448395 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
KNSTRN-203ENST00000448395 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
KNSTRN-203ENST00000448395 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
KNSTRN-203ENST00000448395 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
KNSTRN-203ENST00000448395 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
KNSTRN-203ENST00000448395 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
KNSTRN-203ENST00000448395 KIF21BO75037 1637 aa19.35■□□□□ 0.69
KNSTRN-203ENST00000448395 CUX1P39880 1505 aa19.35■□□□□ 0.69
KNSTRN-203ENST00000448395 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
KNSTRN-203ENST00000448395 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
KNSTRN-203ENST00000448395 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
KNSTRN-203ENST00000448395 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
KNSTRN-203ENST00000448395 HRCP23327 699 aa19.24■□□□□ 0.67
KNSTRN-203ENST00000448395 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
KNSTRN-203ENST00000448395 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
KNSTRN-203ENST00000448395 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
KNSTRN-203ENST00000448395 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
KNSTRN-203ENST00000448395 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.66
KNSTRN-203ENST00000448395 PRXQ9BXM0 1461 aa19.14■□□□□ 0.66
KNSTRN-203ENST00000448395 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.66
KNSTRN-203ENST00000448395 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
KNSTRN-203ENST00000448395 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
KNSTRN-203ENST00000448395 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
KNSTRN-203ENST00000448395 CLIP1P30622 1438 aa19.05■□□□□ 0.64
KNSTRN-203ENST00000448395 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
KNSTRN-203ENST00000448395 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
KNSTRN-203ENST00000448395 IGF1RP08069 1367 aa18.96■□□□□ 0.63
KNSTRN-203ENST00000448395 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
KNSTRN-203ENST00000448395 CHD1O14646 1710 aa18.95■□□□□ 0.62
KNSTRN-203ENST00000448395 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
KNSTRN-203ENST00000448395 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
KNSTRN-203ENST00000448395 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
KNSTRN-203ENST00000448395 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
KNSTRN-203ENST00000448395 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
KNSTRN-203ENST00000448395 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
KNSTRN-203ENST00000448395 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms