RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
LIN54-206ENST00000506560 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
LIN54-206ENST00000506560 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
LIN54-206ENST00000506560 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
LIN54-206ENST00000506560 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
LIN54-206ENST00000506560 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
LIN54-206ENST00000506560 ABCC9O60706 1549 aa22■■□□□ 1.11
LIN54-206ENST00000506560 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
LIN54-206ENST00000506560 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
LIN54-206ENST00000506560 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
LIN54-206ENST00000506560 NACADO15069 1562 aa21.53■■□□□ 1.04
LIN54-206ENST00000506560 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
LIN54-206ENST00000506560 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
LIN54-206ENST00000506560 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
LIN54-206ENST00000506560 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
LIN54-206ENST00000506560 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
LIN54-206ENST00000506560 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
LIN54-206ENST00000506560 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
LIN54-206ENST00000506560 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
LIN54-206ENST00000506560 WIZO95785 1651 aa20.79■□□□□ 0.92
LIN54-206ENST00000506560 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
LIN54-206ENST00000506560 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
LIN54-206ENST00000506560 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
LIN54-206ENST00000506560 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
LIN54-206ENST00000506560 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
LIN54-206ENST00000506560 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
LIN54-206ENST00000506560 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
LIN54-206ENST00000506560 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
LIN54-206ENST00000506560 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
LIN54-206ENST00000506560 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
LIN54-206ENST00000506560 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
LIN54-206ENST00000506560 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
LIN54-206ENST00000506560 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
LIN54-206ENST00000506560 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
LIN54-206ENST00000506560 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
LIN54-206ENST00000506560 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
LIN54-206ENST00000506560 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
LIN54-206ENST00000506560 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
LIN54-206ENST00000506560 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LIN54-206ENST00000506560 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
LIN54-206ENST00000506560 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
LIN54-206ENST00000506560 CFTRP13569 1480 aa19.62■□□□□ 0.73
LIN54-206ENST00000506560 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
LIN54-206ENST00000506560 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
LIN54-206ENST00000506560 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
LIN54-206ENST00000506560 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
LIN54-206ENST00000506560 CUX1P39880 1505 aa19.52■□□□□ 0.72
LIN54-206ENST00000506560 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.71
LIN54-206ENST00000506560 EEA1Q15075 1411 aa19.48■□□□□ 0.71
LIN54-206ENST00000506560 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
LIN54-206ENST00000506560 NESP48681 1621 aa19.45■□□□□ 0.7
LIN54-206ENST00000506560 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
LIN54-206ENST00000506560 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
LIN54-206ENST00000506560 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
LIN54-206ENST00000506560 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
LIN54-206ENST00000506560 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
LIN54-206ENST00000506560 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
LIN54-206ENST00000506560 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.69
LIN54-206ENST00000506560 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.69
LIN54-206ENST00000506560 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
LIN54-206ENST00000506560 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
LIN54-206ENST00000506560 KIF21BO75037 1637 aa19.3■□□□□ 0.68
LIN54-206ENST00000506560 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.67
LIN54-206ENST00000506560 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
LIN54-206ENST00000506560 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
LIN54-206ENST00000506560 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
LIN54-206ENST00000506560 CUX2O14529 1486 aa19.2■□□□□ 0.66
LIN54-206ENST00000506560 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
LIN54-206ENST00000506560 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
LIN54-206ENST00000506560 HRCP23327 699 aa19.16■□□□□ 0.66
LIN54-206ENST00000506560 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
LIN54-206ENST00000506560 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
LIN54-206ENST00000506560 CLIP1P30622 1438 aa19.14■□□□□ 0.65
LIN54-206ENST00000506560 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
LIN54-206ENST00000506560 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
LIN54-206ENST00000506560 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
LIN54-206ENST00000506560 IGF1RP08069 1367 aa19.1■□□□□ 0.65
LIN54-206ENST00000506560 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
LIN54-206ENST00000506560 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.65
LIN54-206ENST00000506560 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
LIN54-206ENST00000506560 CARMIL1Q5VZK9 1371 aa19■□□□□ 0.63
LIN54-206ENST00000506560 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
LIN54-206ENST00000506560 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
LIN54-206ENST00000506560 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
LIN54-206ENST00000506560 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
LIN54-206ENST00000506560 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
LIN54-206ENST00000506560 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
LIN54-206ENST00000506560 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
LIN54-206ENST00000506560 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
LIN54-206ENST00000506560 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
LIN54-206ENST00000506560 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
LIN54-206ENST00000506560 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
LIN54-206ENST00000506560 APLP2Q06481 763 aa18.79■□□□□ 0.6
LIN54-206ENST00000506560 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
LIN54-206ENST00000506560 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
LIN54-206ENST00000506560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
LIN54-206ENST00000506560 CUL7Q14999 1698 aa18.75■□□□□ 0.59
LIN54-206ENST00000506560 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
LIN54-206ENST00000506560 ZNF608Q9ULD9 1512 aaPredicted RBP18.72■□□□□ 0.59
LIN54-206ENST00000506560 WDR62O43379 1518 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms