RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
TMEM200A-201ENST00000296978 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
TMEM200A-201ENST00000296978 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.06
TMEM200A-201ENST00000296978 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
TMEM200A-201ENST00000296978 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.92
TMEM200A-201ENST00000296978 HRCP23327 699 aa20.6■□□□□ 0.89
TMEM200A-201ENST00000296978 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
TMEM200A-201ENST00000296978 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
TMEM200A-201ENST00000296978 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
TMEM200A-201ENST00000296978 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
TMEM200A-201ENST00000296978 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
TMEM200A-201ENST00000296978 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
TMEM200A-201ENST00000296978 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
TMEM200A-201ENST00000296978 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
TMEM200A-201ENST00000296978 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
TMEM200A-201ENST00000296978 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
TMEM200A-201ENST00000296978 ABCC9O60706 1549 aa19.73■□□□□ 0.75
TMEM200A-201ENST00000296978 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
TMEM200A-201ENST00000296978 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
TMEM200A-201ENST00000296978 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
TMEM200A-201ENST00000296978 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
TMEM200A-201ENST00000296978 CCER1Q8TC90 406 aaPredicted RBP19.52■□□□□ 0.72
TMEM200A-201ENST00000296978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
TMEM200A-201ENST00000296978 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
TMEM200A-201ENST00000296978 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
TMEM200A-201ENST00000296978 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
TMEM200A-201ENST00000296978 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
TMEM200A-201ENST00000296978 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
TMEM200A-201ENST00000296978 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.66
TMEM200A-201ENST00000296978 UBTFP17480 764 aaKnown RBP19.14■□□□□ 0.65
TMEM200A-201ENST00000296978 MYT1Q01538 1121 aa19.12■□□□□ 0.65
TMEM200A-201ENST00000296978 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
TMEM200A-201ENST00000296978 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
TMEM200A-201ENST00000296978 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
TMEM200A-201ENST00000296978 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
TMEM200A-201ENST00000296978 ACIN1Q9UKV3 1341 aaKnown RBP19.02■□□□□ 0.63
TMEM200A-201ENST00000296978 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
TMEM200A-201ENST00000296978 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
TMEM200A-201ENST00000296978 APLP2Q06481 763 aa18.91■□□□□ 0.62
TMEM200A-201ENST00000296978 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
TMEM200A-201ENST00000296978 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
TMEM200A-201ENST00000296978 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
TMEM200A-201ENST00000296978 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
TMEM200A-201ENST00000296978 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
TMEM200A-201ENST00000296978 MIER1Q8N108 512 aa18.58■□□□□ 0.56
TMEM200A-201ENST00000296978 WIZO95785 1651 aa18.57■□□□□ 0.56
TMEM200A-201ENST00000296978 ITGAEP38570 1179 aa18.53■□□□□ 0.56
TMEM200A-201ENST00000296978 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
TMEM200A-201ENST00000296978 SOGA1O94964 1423 aa18.52■□□□□ 0.55
TMEM200A-201ENST00000296978 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
TMEM200A-201ENST00000296978 NACADO15069 1562 aa18.44■□□□□ 0.54
TMEM200A-201ENST00000296978 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
TMEM200A-201ENST00000296978 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
TMEM200A-201ENST00000296978 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.53
TMEM200A-201ENST00000296978 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
TMEM200A-201ENST00000296978 CLIP1P30622 1438 aa18.28■□□□□ 0.52
TMEM200A-201ENST00000296978 GOLGA3Q08378 1498 aa18.27■□□□□ 0.52
TMEM200A-201ENST00000296978 BCANQ96GW7 911 aa18.25■□□□□ 0.51
TMEM200A-201ENST00000296978 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
TMEM200A-201ENST00000296978 EEA1Q15075 1411 aa18.2■□□□□ 0.5
TMEM200A-201ENST00000296978 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
TMEM200A-201ENST00000296978 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
TMEM200A-201ENST00000296978 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
TMEM200A-201ENST00000296978 NEFLP07196 543 aa18.07■□□□□ 0.48
TMEM200A-201ENST00000296978 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
TMEM200A-201ENST00000296978 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
TMEM200A-201ENST00000296978 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
TMEM200A-201ENST00000296978 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
TMEM200A-201ENST00000296978 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
TMEM200A-201ENST00000296978 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
TMEM200A-201ENST00000296978 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
TMEM200A-201ENST00000296978 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
TMEM200A-201ENST00000296978 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
TMEM200A-201ENST00000296978 FKBP8Q14318 412 aa17.96■□□□□ 0.47
TMEM200A-201ENST00000296978 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
TMEM200A-201ENST00000296978 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
TMEM200A-201ENST00000296978 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
TMEM200A-201ENST00000296978 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
TMEM200A-201ENST00000296978 SIN3AQ96ST3 1273 aa17.85■□□□□ 0.45
TMEM200A-201ENST00000296978 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
TMEM200A-201ENST00000296978 BAZ1BQ9UIG0 1483 aaKnown RBP17.85■□□□□ 0.45
TMEM200A-201ENST00000296978 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.45
TMEM200A-201ENST00000296978 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
TMEM200A-201ENST00000296978 ANP32CO43423 234 aa17.82■□□□□ 0.44
TMEM200A-201ENST00000296978 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
TMEM200A-201ENST00000296978 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
TMEM200A-201ENST00000296978 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
TMEM200A-201ENST00000296978 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
TMEM200A-201ENST00000296978 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
TMEM200A-201ENST00000296978 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
TMEM200A-201ENST00000296978 KIF21BO75037 1637 aa17.74■□□□□ 0.43
TMEM200A-201ENST00000296978 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
TMEM200A-201ENST00000296978 ANP32EQ9BTT0 268 aa17.69■□□□□ 0.42
TMEM200A-201ENST00000296978 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
TMEM200A-201ENST00000296978 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
TMEM200A-201ENST00000296978 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
TMEM200A-201ENST00000296978 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
TMEM200A-201ENST00000296978 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
TMEM200A-201ENST00000296978 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
TMEM200A-201ENST00000296978 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms