RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
NUP93-220ENST00000569842 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
NUP93-220ENST00000569842 ABCC9O60706 1549 aa24.61■■□□□ 1.53
NUP93-220ENST00000569842 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
NUP93-220ENST00000569842 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
NUP93-220ENST00000569842 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
NUP93-220ENST00000569842 NACADO15069 1562 aa23.89■■□□□ 1.42
NUP93-220ENST00000569842 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
NUP93-220ENST00000569842 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
NUP93-220ENST00000569842 SCRIBQ14160 1630 aa23.39■■□□□ 1.33
NUP93-220ENST00000569842 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
NUP93-220ENST00000569842 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
NUP93-220ENST00000569842 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
NUP93-220ENST00000569842 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
NUP93-220ENST00000569842 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
NUP93-220ENST00000569842 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
NUP93-220ENST00000569842 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
NUP93-220ENST00000569842 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
NUP93-220ENST00000569842 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
NUP93-220ENST00000569842 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
NUP93-220ENST00000569842 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
NUP93-220ENST00000569842 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
NUP93-220ENST00000569842 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
NUP93-220ENST00000569842 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
NUP93-220ENST00000569842 WIZO95785 1651 aa22.15■■□□□ 1.14
NUP93-220ENST00000569842 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
NUP93-220ENST00000569842 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
NUP93-220ENST00000569842 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
NUP93-220ENST00000569842 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
NUP93-220ENST00000569842 HMGXB3Q12766 1538 aa21.98■■□□□ 1.11
NUP93-220ENST00000569842 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
NUP93-220ENST00000569842 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
NUP93-220ENST00000569842 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
NUP93-220ENST00000569842 NESP48681 1621 aa21.44■■□□□ 1.02
NUP93-220ENST00000569842 CFTRP13569 1480 aa21.43■■□□□ 1.02
NUP93-220ENST00000569842 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
NUP93-220ENST00000569842 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
NUP93-220ENST00000569842 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
NUP93-220ENST00000569842 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
NUP93-220ENST00000569842 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
NUP93-220ENST00000569842 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.98
NUP93-220ENST00000569842 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.97
NUP93-220ENST00000569842 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
NUP93-220ENST00000569842 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
NUP93-220ENST00000569842 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
NUP93-220ENST00000569842 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
NUP93-220ENST00000569842 CUX1P39880 1505 aa20.96■□□□□ 0.95
NUP93-220ENST00000569842 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
NUP93-220ENST00000569842 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
NUP93-220ENST00000569842 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
NUP93-220ENST00000569842 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
NUP93-220ENST00000569842 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
NUP93-220ENST00000569842 WDR62O43379 1518 aa20.9■□□□□ 0.94
NUP93-220ENST00000569842 TRIM41Q8WV44 630 aa20.89■□□□□ 0.94
NUP93-220ENST00000569842 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
NUP93-220ENST00000569842 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
NUP93-220ENST00000569842 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
NUP93-220ENST00000569842 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
NUP93-220ENST00000569842 CUX2O14529 1486 aa20.74■□□□□ 0.91
NUP93-220ENST00000569842 SOGA1O94964 1423 aa20.73■□□□□ 0.91
NUP93-220ENST00000569842 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
NUP93-220ENST00000569842 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
NUP93-220ENST00000569842 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
NUP93-220ENST00000569842 ABCA10Q8WWZ4 1543 aa20.62■□□□□ 0.89
NUP93-220ENST00000569842 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.89
NUP93-220ENST00000569842 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
NUP93-220ENST00000569842 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
NUP93-220ENST00000569842 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.886e-8■■■■■ 37.7
NUP93-220ENST00000569842 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
NUP93-220ENST00000569842 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
NUP93-220ENST00000569842 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
NUP93-220ENST00000569842 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
NUP93-220ENST00000569842 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
NUP93-220ENST00000569842 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
NUP93-220ENST00000569842 EEA1Q15075 1411 aa20.43■□□□□ 0.86
NUP93-220ENST00000569842 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
NUP93-220ENST00000569842 IGF1RP08069 1367 aa20.41■□□□□ 0.86
NUP93-220ENST00000569842 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
NUP93-220ENST00000569842 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
NUP93-220ENST00000569842 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
NUP93-220ENST00000569842 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
NUP93-220ENST00000569842 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
NUP93-220ENST00000569842 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
NUP93-220ENST00000569842 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
NUP93-220ENST00000569842 CUL7Q14999 1698 aa20.26■□□□□ 0.83
NUP93-220ENST00000569842 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
NUP93-220ENST00000569842 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
NUP93-220ENST00000569842 FBLN2P98095 1184 aa20.23■□□□□ 0.83
NUP93-220ENST00000569842 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
NUP93-220ENST00000569842 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
NUP93-220ENST00000569842 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
NUP93-220ENST00000569842 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.83
NUP93-220ENST00000569842 KIF21BO75037 1637 aa20.17■□□□□ 0.82
NUP93-220ENST00000569842 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
NUP93-220ENST00000569842 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
NUP93-220ENST00000569842 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
NUP93-220ENST00000569842 CHD1O14646 1710 aa20.11■□□□□ 0.81
NUP93-220ENST00000569842 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
NUP93-220ENST00000569842 NUP160Q12769 1436 aa20.03■□□□□ 0.8
NUP93-220ENST00000569842 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms