Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCA3PQ9Y6N3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA3PQ9Y6N3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 CA15P2-201ENST00000611168 834 ntBASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLCA3PQ9Y6N3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCA3PQ9Y6N3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLCA3PQ9Y6N3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 AC068587.7-201ENST00000641602 218 ntBASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCA3PQ9Y6N3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 AP005435.1-201ENST00000529293 1178 ntBASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLCA3PQ9Y6N3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms