Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFWD2Q8NHY2 AC244015.2-201ENST00000616358 1861 ntBASIC21.52■■□□□ 1.03
RFWD2Q8NHY2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.51■■□□□ 1.03
RFWD2Q8NHY2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFWD2Q8NHY2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFWD2Q8NHY2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 AL157384.1-201ENST00000445995 2473 ntBASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFWD2Q8NHY2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 LINC01960-201ENST00000563759 1884 ntBASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 AC120024.1-201ENST00000562672 995 ntBASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 AF106564.1-201ENST00000607058 2553 ntBASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RFWD2Q8NHY2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 AC010980.1-201ENST00000587192 1142 ntBASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.46■■□□□ 1.03
RFWD2Q8NHY2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
RFWD2Q8NHY2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.45■■□□□ 1.03
RFWD2Q8NHY2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 AC022616.5-201ENST00000518796 181 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms