Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A1P61619 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A1P61619 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A1P61619 AC242852.2-201ENST00000615738 1807 ntBASIC18.97■□□□□ 0.63
SEC61A1P61619 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A1P61619 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
SEC61A1P61619 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SEC61A1P61619 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.96■□□□□ 0.63
SEC61A1P61619 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEC61A1P61619 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.96■□□□□ 0.63
SEC61A1P61619 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SEC61A1P61619 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.96■□□□□ 0.63
SEC61A1P61619 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC61A1P61619 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC61A1P61619 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SEC61A1P61619 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.95■□□□□ 0.62
SEC61A1P61619 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC61A1P61619 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A1P61619 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A1P61619 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
SEC61A1P61619 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A1P61619 AC096631.2-201ENST00000436136 790 ntBASIC18.94■□□□□ 0.62
SEC61A1P61619 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.94■□□□□ 0.62
SEC61A1P61619 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC61A1P61619 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEC61A1P61619 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SEC61A1P61619 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC61A1P61619 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SEC61A1P61619 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SEC61A1P61619 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A1P61619 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC61A1P61619 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
SEC61A1P61619 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC61A1P61619 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC61A1P61619 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC61A1P61619 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 AC110285.6-201ENST00000617652 491 ntBASIC18.93■□□□□ 0.62
SEC61A1P61619 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SEC61A1P61619 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC61A1P61619 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEC61A1P61619 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.92■□□□□ 0.62
SEC61A1P61619 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEC61A1P61619 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC61A1P61619 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SEC61A1P61619 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.92■□□□□ 0.62
SEC61A1P61619 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 AC073130.3-201ENST00000624389 2278 ntBASIC18.91■□□□□ 0.62
SEC61A1P61619 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
SEC61A1P61619 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 AL139246.5-201ENST00000606645 996 ntBASIC18.91■□□□□ 0.62
SEC61A1P61619 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 ALDH1A3-203ENST00000557963 1670 ntBASIC18.91■□□□□ 0.62
SEC61A1P61619 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.91■□□□□ 0.62
SEC61A1P61619 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SEC61A1P61619 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.91■□□□□ 0.62
SEC61A1P61619 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEC61A1P61619 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SEC61A1P61619 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms