Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.09■□□□□ 0.81
PRKCAP17252 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRKCAP17252 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.09■□□□□ 0.81
PRKCAP17252 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.09■□□□□ 0.81
PRKCAP17252 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRKCAP17252 SERBP1P1-201ENST00000396021 1160 ntBASIC20.09■□□□□ 0.81
PRKCAP17252 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRKCAP17252 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.09■□□□□ 0.81
PRKCAP17252 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.09■□□□□ 0.81
PRKCAP17252 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
PRKCAP17252 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRKCAP17252 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.09■□□□□ 0.81
PRKCAP17252 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PRKCAP17252 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRKCAP17252 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PRKCAP17252 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.09■□□□□ 0.81
PRKCAP17252 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PRKCAP17252 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRKCAP17252 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRKCAP17252 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.08■□□□□ 0.81
PRKCAP17252 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRKCAP17252 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.08■□□□□ 0.81
PRKCAP17252 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
PRKCAP17252 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.08■□□□□ 0.81
PRKCAP17252 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRKCAP17252 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRKCAP17252 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
PRKCAP17252 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.08■□□□□ 0.8
PRKCAP17252 AC004687.1-201ENST00000579003 1625 ntBASIC20.08■□□□□ 0.8
PRKCAP17252 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRKCAP17252 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRKCAP17252 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRKCAP17252 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.08■□□□□ 0.8
PRKCAP17252 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 AC133637.1-201ENST00000624115 1537 ntBASIC20.07■□□□□ 0.8
PRKCAP17252 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PRKCAP17252 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PRKCAP17252 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PRKCAP17252 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PRKCAP17252 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
PRKCAP17252 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.07■□□□□ 0.8
PRKCAP17252 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PRKCAP17252 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
PRKCAP17252 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRKCAP17252 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.06■□□□□ 0.8
PRKCAP17252 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRKCAP17252 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.06■□□□□ 0.8
PRKCAP17252 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PRKCAP17252 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.06■□□□□ 0.8
PRKCAP17252 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRKCAP17252 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.06■□□□□ 0.8
PRKCAP17252 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PRKCAP17252 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PRKCAP17252 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PRKCAP17252 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.05■□□□□ 0.8
PRKCAP17252 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
PRKCAP17252 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRKCAP17252 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 AC007375.3-201ENST00000600936 2314 ntBASIC20.04■□□□□ 0.8
PRKCAP17252 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRKCAP17252 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 UNC93B3-201ENST00000308076 687 ntBASIC20.04■□□□□ 0.8
PRKCAP17252 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.04■□□□□ 0.8
PRKCAP17252 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.04■□□□□ 0.8
PRKCAP17252 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.04■□□□□ 0.8
PRKCAP17252 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.04■□□□□ 0.8
PRKCAP17252 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.04■□□□□ 0.8
PRKCAP17252 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.04■□□□□ 0.8
PRKCAP17252 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRKCAP17252 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms