Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF253O75346 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF253O75346 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
ZNF253O75346 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF253O75346 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF253O75346 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ZNF253O75346 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF253O75346 AC004987.1-201ENST00000428627 508 ntBASIC16.9■□□□□ 0.3
ZNF253O75346 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF253O75346 PVT1_1.1-201ENST00000615125 194 ntBASIC16.9■□□□□ 0.3
ZNF253O75346 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF253O75346 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF253O75346 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF253O75346 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF253O75346 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ZNF253O75346 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF253O75346 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF253O75346 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF253O75346 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF253O75346 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ZNF253O75346 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF253O75346 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF253O75346 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF253O75346 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ZNF253O75346 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF253O75346 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF253O75346 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF253O75346 TSPY13P-201ENST00000338964 914 ntBASIC16.88■□□□□ 0.29
ZNF253O75346 SNX5-217ENST00000606557 1087 ntBASIC16.88■□□□□ 0.29
ZNF253O75346 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF253O75346 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF253O75346 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ZNF253O75346 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF253O75346 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF253O75346 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF253O75346 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.87■□□□□ 0.29
ZNF253O75346 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF253O75346 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF253O75346 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF253O75346 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF253O75346 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.87■□□□□ 0.29
ZNF253O75346 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF253O75346 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF253O75346 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF253O75346 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF253O75346 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF253O75346 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 AC010980.1-201ENST00000587192 1142 ntBASIC16.86■□□□□ 0.29
ZNF253O75346 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF253O75346 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF253O75346 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF253O75346 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF253O75346 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ZNF253O75346 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF253O75346 AC092053.2-201ENST00000640557 1818 ntBASIC16.85■□□□□ 0.29
ZNF253O75346 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF253O75346 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF253O75346 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF253O75346 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF253O75346 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms