Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC104440.1-201ENST00000605010 343 ntBASIC11.75□□□□□ -0.53
P04436 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC11.75□□□□□ -0.53
P04436 PRKN-210ENST00000612540 603 ntTSL 5 BASIC11.75□□□□□ -0.53
P04436 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC11.75□□□□□ -0.53
P04436 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC11.75□□□□□ -0.53
P04436 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04436 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC11.75□□□□□ -0.53
P04436 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.75□□□□□ -0.53
P04436 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
P04436 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P04436 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.75□□□□□ -0.53
P04436 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04436 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.75□□□□□ -0.53
P04436 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC11.75□□□□□ -0.53
P04436 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 AL050341.2-201ENST00000567508 1541 ntBASIC11.75□□□□□ -0.53
P04436 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.75□□□□□ -0.53
P04436 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
P04436 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04436 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
P04436 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 CICP8-201ENST00000455800 2813 ntBASIC11.74□□□□□ -0.53
P04436 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 PCDHB18P-202ENST00000526308 3197 ntBASIC11.74□□□□□ -0.53
P04436 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04436 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P04436 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 UROS-201ENST00000368774 744 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 HNRNPA1P8-201ENST00000436090 951 ntBASIC11.74□□□□□ -0.53
P04436 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 UGT1A12P-201ENST00000447084 853 ntBASIC11.74□□□□□ -0.53
P04436 AC007679.1-201ENST00000458609 502 ntBASIC11.74□□□□□ -0.53
P04436 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 AC113340.1-201ENST00000475257 636 ntBASIC11.74□□□□□ -0.53
P04436 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
P04436 RNF7-205ENST00000480908 782 ntTSL 4 BASIC11.74□□□□□ -0.53
P04436 RN7SL638P-201ENST00000494527 290 ntBASIC11.74□□□□□ -0.53
P04436 ISL1-203ENST00000511384 981 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.74□□□□□ -0.53
P04436 AC009812.1-201ENST00000605948 1059 ntBASIC11.74□□□□□ -0.53
P04436 RBP1-206ENST00000617459 667 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04436 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
P04436 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
P04436 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04436 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC11.74□□□□□ -0.53
P04436 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P04436 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.74□□□□□ -0.53
P04436 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms