RNA–Protein interactions for RNA: ENST00000569418.5

CYLD-214, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-214ENST00000569418 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
CYLD-214ENST00000569418 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
CYLD-214ENST00000569418 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
CYLD-214ENST00000569418 ABCC9O60706 1549 aa24.42■■□□□ 1.5
CYLD-214ENST00000569418 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
CYLD-214ENST00000569418 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
CYLD-214ENST00000569418 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
CYLD-214ENST00000569418 NACADO15069 1562 aa23.64■■□□□ 1.37
CYLD-214ENST00000569418 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
CYLD-214ENST00000569418 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
CYLD-214ENST00000569418 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CYLD-214ENST00000569418 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
CYLD-214ENST00000569418 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
CYLD-214ENST00000569418 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
CYLD-214ENST00000569418 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
CYLD-214ENST00000569418 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
CYLD-214ENST00000569418 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
CYLD-214ENST00000569418 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
CYLD-214ENST00000569418 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
CYLD-214ENST00000569418 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
CYLD-214ENST00000569418 WIZO95785 1651 aa22.37■■□□□ 1.17
CYLD-214ENST00000569418 EIF4G1Q04637 1599 aaKnown RBP22.15■■□□□ 1.14
CYLD-214ENST00000569418 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
CYLD-214ENST00000569418 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
CYLD-214ENST00000569418 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
CYLD-214ENST00000569418 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
CYLD-214ENST00000569418 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
CYLD-214ENST00000569418 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
CYLD-214ENST00000569418 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
CYLD-214ENST00000569418 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
CYLD-214ENST00000569418 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
CYLD-214ENST00000569418 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
CYLD-214ENST00000569418 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
CYLD-214ENST00000569418 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
CYLD-214ENST00000569418 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
CYLD-214ENST00000569418 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
CYLD-214ENST00000569418 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
CYLD-214ENST00000569418 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.01
CYLD-214ENST00000569418 CFTRP13569 1480 aa21.38■■□□□ 1.01
CYLD-214ENST00000569418 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
CYLD-214ENST00000569418 NESP48681 1621 aa21.3■■□□□ 1
CYLD-214ENST00000569418 LOC105371045A0A1W2PR82 267 aa21.27■■□□□ 1
CYLD-214ENST00000569418 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
CYLD-214ENST00000569418 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
CYLD-214ENST00000569418 SOGA1O94964 1423 aa21.11■□□□□ 0.97
CYLD-214ENST00000569418 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
CYLD-214ENST00000569418 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
CYLD-214ENST00000569418 CUX1P39880 1505 aa21.08■□□□□ 0.97
CYLD-214ENST00000569418 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
CYLD-214ENST00000569418 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
CYLD-214ENST00000569418 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
CYLD-214ENST00000569418 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
CYLD-214ENST00000569418 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
CYLD-214ENST00000569418 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
CYLD-214ENST00000569418 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
CYLD-214ENST00000569418 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CYLD-214ENST00000569418 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
CYLD-214ENST00000569418 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
CYLD-214ENST00000569418 UBTFP17480 764 aaKnown RBP20.89■□□□□ 0.94
CYLD-214ENST00000569418 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
CYLD-214ENST00000569418 EEA1Q15075 1411 aa20.88■□□□□ 0.93
CYLD-214ENST00000569418 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
CYLD-214ENST00000569418 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
CYLD-214ENST00000569418 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
CYLD-214ENST00000569418 CUX2O14529 1486 aa20.81■□□□□ 0.92
CYLD-214ENST00000569418 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
CYLD-214ENST00000569418 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
CYLD-214ENST00000569418 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
CYLD-214ENST00000569418 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
CYLD-214ENST00000569418 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
CYLD-214ENST00000569418 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
CYLD-214ENST00000569418 FBLN2P98095 1184 aa20.64■□□□□ 0.9
CYLD-214ENST00000569418 IGF1RP08069 1367 aa20.63■□□□□ 0.89
CYLD-214ENST00000569418 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
CYLD-214ENST00000569418 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
CYLD-214ENST00000569418 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
CYLD-214ENST00000569418 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
CYLD-214ENST00000569418 KIF21BO75037 1637 aa20.58■□□□□ 0.88
CYLD-214ENST00000569418 WDR62O43379 1518 aa20.57■□□□□ 0.88
CYLD-214ENST00000569418 PRXQ9BXM0 1461 aa20.57■□□□□ 0.88
CYLD-214ENST00000569418 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
CYLD-214ENST00000569418 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
CYLD-214ENST00000569418 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
CYLD-214ENST00000569418 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
CYLD-214ENST00000569418 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
CYLD-214ENST00000569418 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
CYLD-214ENST00000569418 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
CYLD-214ENST00000569418 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
CYLD-214ENST00000569418 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
CYLD-214ENST00000569418 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
CYLD-214ENST00000569418 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
CYLD-214ENST00000569418 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
CYLD-214ENST00000569418 CLIP1P30622 1438 aa20.41■□□□□ 0.86
CYLD-214ENST00000569418 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.86
CYLD-214ENST00000569418 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
CYLD-214ENST00000569418 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
CYLD-214ENST00000569418 CUL7Q14999 1698 aa20.32■□□□□ 0.84
CYLD-214ENST00000569418 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
CYLD-214ENST00000569418 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
CYLD-214ENST00000569418 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms