RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
COL11A1-210ENST00000512756 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
COL11A1-210ENST00000512756 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
COL11A1-210ENST00000512756 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
COL11A1-210ENST00000512756 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
COL11A1-210ENST00000512756 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
COL11A1-210ENST00000512756 APLP2Q06481 763 aa19.53■□□□□ 0.72
COL11A1-210ENST00000512756 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
COL11A1-210ENST00000512756 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
COL11A1-210ENST00000512756 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
COL11A1-210ENST00000512756 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
COL11A1-210ENST00000512756 TRIM41Q8WV44 630 aa19■□□□□ 0.63
COL11A1-210ENST00000512756 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
COL11A1-210ENST00000512756 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
COL11A1-210ENST00000512756 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
COL11A1-210ENST00000512756 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
COL11A1-210ENST00000512756 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
COL11A1-210ENST00000512756 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
COL11A1-210ENST00000512756 NEFLP07196 543 aa18.59■□□□□ 0.57
COL11A1-210ENST00000512756 MYT1Q01538 1121 aa18.56■□□□□ 0.56
COL11A1-210ENST00000512756 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
COL11A1-210ENST00000512756 YTHDC1Q96MU7 727 aaKnown RBP18.44■□□□□ 0.54
COL11A1-210ENST00000512756 HRCP23327 699 aa18.39■□□□□ 0.53
COL11A1-210ENST00000512756 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
COL11A1-210ENST00000512756 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
COL11A1-210ENST00000512756 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
COL11A1-210ENST00000512756 ITGAEP38570 1179 aa18.08■□□□□ 0.48
COL11A1-210ENST00000512756 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
COL11A1-210ENST00000512756 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
COL11A1-210ENST00000512756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
COL11A1-210ENST00000512756 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
COL11A1-210ENST00000512756 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
COL11A1-210ENST00000512756 MYT1LQ9UL68 1186 aa17.87■□□□□ 0.45
COL11A1-210ENST00000512756 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
COL11A1-210ENST00000512756 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
COL11A1-210ENST00000512756 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
COL11A1-210ENST00000512756 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.41
COL11A1-210ENST00000512756 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
COL11A1-210ENST00000512756 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
COL11A1-210ENST00000512756 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
COL11A1-210ENST00000512756 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
COL11A1-210ENST00000512756 ANP32CO43423 234 aa17.52■□□□□ 0.4
COL11A1-210ENST00000512756 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
COL11A1-210ENST00000512756 ABCC9O60706 1549 aa17.46■□□□□ 0.39
COL11A1-210ENST00000512756 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL11A1-210ENST00000512756 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
COL11A1-210ENST00000512756 BCANQ96GW7 911 aa17.38■□□□□ 0.37
COL11A1-210ENST00000512756 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
COL11A1-210ENST00000512756 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
COL11A1-210ENST00000512756 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
COL11A1-210ENST00000512756 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
COL11A1-210ENST00000512756 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
COL11A1-210ENST00000512756 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
COL11A1-210ENST00000512756 FBLN2P98095 1184 aa17.15■□□□□ 0.34
COL11A1-210ENST00000512756 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
COL11A1-210ENST00000512756 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
COL11A1-210ENST00000512756 NEFMP07197 916 aa17.12■□□□□ 0.33
COL11A1-210ENST00000512756 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
COL11A1-210ENST00000512756 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.32
COL11A1-210ENST00000512756 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
COL11A1-210ENST00000512756 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
COL11A1-210ENST00000512756 FKBP8Q14318 412 aa16.99■□□□□ 0.31
COL11A1-210ENST00000512756 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
COL11A1-210ENST00000512756 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL11A1-210ENST00000512756 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
COL11A1-210ENST00000512756 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
COL11A1-210ENST00000512756 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
COL11A1-210ENST00000512756 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
COL11A1-210ENST00000512756 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
COL11A1-210ENST00000512756 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
COL11A1-210ENST00000512756 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
COL11A1-210ENST00000512756 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
COL11A1-210ENST00000512756 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.79■□□□□ 0.28
COL11A1-210ENST00000512756 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
COL11A1-210ENST00000512756 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
COL11A1-210ENST00000512756 CLIP1P30622 1438 aa16.75■□□□□ 0.27
COL11A1-210ENST00000512756 ESF1Q9H501 851 aaKnown RBP16.75■□□□□ 0.27
COL11A1-210ENST00000512756 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
COL11A1-210ENST00000512756 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
COL11A1-210ENST00000512756 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
COL11A1-210ENST00000512756 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
COL11A1-210ENST00000512756 EEA1Q15075 1411 aa16.73■□□□□ 0.27
COL11A1-210ENST00000512756 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
COL11A1-210ENST00000512756 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
COL11A1-210ENST00000512756 MIER1Q8N108 512 aa16.71■□□□□ 0.27
COL11A1-210ENST00000512756 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
COL11A1-210ENST00000512756 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.27
COL11A1-210ENST00000512756 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL11A1-210ENST00000512756 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
COL11A1-210ENST00000512756 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL11A1-210ENST00000512756 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL11A1-210ENST00000512756 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
COL11A1-210ENST00000512756 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
COL11A1-210ENST00000512756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL11A1-210ENST00000512756 EIF5BO60841 1220 aaKnown RBP16.63■□□□□ 0.25
COL11A1-210ENST00000512756 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
COL11A1-210ENST00000512756 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
COL11A1-210ENST00000512756 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
COL11A1-210ENST00000512756 NBR1Q14596 966 aa16.56■□□□□ 0.24
COL11A1-210ENST00000512756 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms