RNA–Protein interactions for RNA: ENST00000391796.7

CD33-202, Transcript of CD33 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD33, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD33-202ENST00000391796 NISCHQ9Y2I1 1504 aa30.4■■■□□ 2.46
CD33-202ENST00000391796 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
CD33-202ENST00000391796 ABCC9O60706 1549 aa26.23■■□□□ 1.79
CD33-202ENST00000391796 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
CD33-202ENST00000391796 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
CD33-202ENST00000391796 NACADO15069 1562 aa25.36■■□□□ 1.65
CD33-202ENST00000391796 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
CD33-202ENST00000391796 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
CD33-202ENST00000391796 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
CD33-202ENST00000391796 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
CD33-202ENST00000391796 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
CD33-202ENST00000391796 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
CD33-202ENST00000391796 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
CD33-202ENST00000391796 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
CD33-202ENST00000391796 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
CD33-202ENST00000391796 CC2D2AQ9P2K1 1620 aa23.76■■□□□ 1.39
CD33-202ENST00000391796 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
CD33-202ENST00000391796 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
CD33-202ENST00000391796 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
CD33-202ENST00000391796 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
CD33-202ENST00000391796 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
CD33-202ENST00000391796 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
CD33-202ENST00000391796 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
CD33-202ENST00000391796 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
CD33-202ENST00000391796 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
CD33-202ENST00000391796 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
CD33-202ENST00000391796 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
CD33-202ENST00000391796 WIZO95785 1651 aa23.22■■□□□ 1.31
CD33-202ENST00000391796 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
CD33-202ENST00000391796 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
CD33-202ENST00000391796 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
CD33-202ENST00000391796 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
CD33-202ENST00000391796 NESP48681 1621 aa22.71■■□□□ 1.23
CD33-202ENST00000391796 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
CD33-202ENST00000391796 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
CD33-202ENST00000391796 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
CD33-202ENST00000391796 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
CD33-202ENST00000391796 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
CD33-202ENST00000391796 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
CD33-202ENST00000391796 CFTRP13569 1480 aa22.56■■□□□ 1.2
CD33-202ENST00000391796 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
CD33-202ENST00000391796 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
CD33-202ENST00000391796 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
CD33-202ENST00000391796 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
CD33-202ENST00000391796 CUX2O14529 1486 aa22.33■■□□□ 1.16
CD33-202ENST00000391796 WDR62O43379 1518 aa22.26■■□□□ 1.15
CD33-202ENST00000391796 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
CD33-202ENST00000391796 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
CD33-202ENST00000391796 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
CD33-202ENST00000391796 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
CD33-202ENST00000391796 CUX1P39880 1505 aa21.96■■□□□ 1.11
CD33-202ENST00000391796 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
CD33-202ENST00000391796 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
CD33-202ENST00000391796 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
CD33-202ENST00000391796 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
CD33-202ENST00000391796 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
CD33-202ENST00000391796 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
CD33-202ENST00000391796 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
CD33-202ENST00000391796 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
CD33-202ENST00000391796 SOGA1O94964 1423 aa21.82■■□□□ 1.08
CD33-202ENST00000391796 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
CD33-202ENST00000391796 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
CD33-202ENST00000391796 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
CD33-202ENST00000391796 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
CD33-202ENST00000391796 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
CD33-202ENST00000391796 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.065e-9■■■■■ 35.2
CD33-202ENST00000391796 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
CD33-202ENST00000391796 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
CD33-202ENST00000391796 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
CD33-202ENST00000391796 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
CD33-202ENST00000391796 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
CD33-202ENST00000391796 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
CD33-202ENST00000391796 CHD1O14646 1710 aa21.52■■□□□ 1.03
CD33-202ENST00000391796 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
CD33-202ENST00000391796 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.03
CD33-202ENST00000391796 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
CD33-202ENST00000391796 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
CD33-202ENST00000391796 FBLN2P98095 1184 aa21.44■■□□□ 1.02
CD33-202ENST00000391796 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
CD33-202ENST00000391796 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
CD33-202ENST00000391796 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
CD33-202ENST00000391796 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
CD33-202ENST00000391796 CUL7Q14999 1698 aa21.37■■□□□ 1.01
CD33-202ENST00000391796 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
CD33-202ENST00000391796 FHAD1B1AJZ9 1412 aa21.35■■□□□ 1.01
CD33-202ENST00000391796 GRIN2AQ12879 1464 aa21.3■■□□□ 1
CD33-202ENST00000391796 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
CD33-202ENST00000391796 IGF1RP08069 1367 aa21.25■□□□□ 0.99
CD33-202ENST00000391796 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
CD33-202ENST00000391796 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
CD33-202ENST00000391796 EEA1Q15075 1411 aa21.2■□□□□ 0.98
CD33-202ENST00000391796 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
CD33-202ENST00000391796 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
CD33-202ENST00000391796 NUP160Q12769 1436 aa21.15■□□□□ 0.98
CD33-202ENST00000391796 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
CD33-202ENST00000391796 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
CD33-202ENST00000391796 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
CD33-202ENST00000391796 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
CD33-202ENST00000391796 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
CD33-202ENST00000391796 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms