Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX11Q9Y5W9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX11Q9Y5W9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SNX11Q9Y5W9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 AC080038.1-201ENST00000611274 1154 ntBASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX11Q9Y5W9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 HLA-L-209ENST00000420110 1011 ntBASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX11Q9Y5W9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 AC006015.1-201ENST00000429970 570 ntBASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX11Q9Y5W9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 AC016769.1-201ENST00000409132 1010 ntBASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 AC137761.2-201ENST00000561729 223 ntBASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 AC145350.3-201ENST00000569033 163 ntBASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 TPRG1LP1-201ENST00000598702 760 ntBASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX11Q9Y5W9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX11Q9Y5W9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SNX11Q9Y5W9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.7■■□□□ 1.07
SNX11Q9Y5W9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX11Q9Y5W9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms