Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMCO4Q9NRQ5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMCO4Q9NRQ5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMCO4Q9NRQ5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SMCO4Q9NRQ5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMCO4Q9NRQ5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMCO4Q9NRQ5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms