Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 DUSP8P5-201ENST00000422884 1815 ntBASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHDC1Q8N7A1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHDC1Q8N7A1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC1Q8N7A1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.58■□□□□ 0.4
KLHDC1Q8N7A1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 SLC47A1P1-202ENST00000449666 945 ntBASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC1Q8N7A1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC1Q8N7A1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 TSPY26P-201ENST00000476365 1326 ntBASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 AL162430.1-201ENST00000480705 870 ntBASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHDC1Q8N7A1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.54■□□□□ 0.4
KLHDC1Q8N7A1 LINC01124-201ENST00000409786 2117 ntBASIC17.54■□□□□ 0.4
KLHDC1Q8N7A1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.54■□□□□ 0.4
KLHDC1Q8N7A1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms