Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.852e-6■■□□□ 13.6
XRCC6P12956 CUL5-205ENST00000532064 1109 ntTSL 520.12■□□□□ 0.812e-6■■□□□ 13.6
XRCC6P12956 DVL1-203ENST00000472445 639 ntTSL 220.09■□□□□ 0.812e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.762e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-202ENST00000593873 556 ntTSL 419.81■□□□□ 0.762e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-204ENST00000603271 580 ntTSL 219.81■□□□□ 0.762e-6■■□□□ 13.6
XRCC6P12956 AAAS-215ENST00000549983 860 ntTSL 318.47■□□□□ 0.552e-6■■□□□ 13.6
XRCC6P12956 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.522e-6■■□□□ 13.6
XRCC6P12956 AAAS-220ENST00000552876 2016 ntTSL 218.23■□□□□ 0.512e-6■■□□□ 13.6
XRCC6P12956 GRK2-203ENST00000524899 751 ntTSL 317.62■□□□□ 0.412e-6■■□□□ 13.6
XRCC6P12956 GRK2-206ENST00000527176 970 ntTSL 217.6■□□□□ 0.412e-6■■□□□ 13.6
XRCC6P12956 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.41■□□□□ 0.385e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-203ENST00000596498 769 ntTSL 317.36■□□□□ 0.372e-6■■□□□ 13.6
XRCC6P12956 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.3■□□□□ 0.362e-6■■□□□ 13.6
XRCC6P12956 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■□□□ 13.6
XRCC6P12956 GABBR1-218ENST00000491829 4212 ntTSL 516.68■□□□□ 0.262e-6■■□□□ 13.6
XRCC6P12956 ZNF106-202ENST00000564754 1470 ntTSL 1 (best)16.66■□□□□ 0.262e-6■■□□□ 13.6
XRCC6P12956 GRK2-202ENST00000416281 4493 ntTSL 216.48■□□□□ 0.232e-6■■□□□ 13.6
XRCC6P12956 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■□□□ 13.6
XRCC6P12956 AAAS-213ENST00000549450 581 ntTSL 515.97■□□□□ 0.152e-6■■□□□ 13.6
XRCC6P12956 MAN2C1-220ENST00000564785 4820 ntTSL 515.66■□□□□ 0.12e-6■■□□□ 13.6
XRCC6P12956 SAR1A-203ENST00000373239 468 ntTSL 315.54■□□□□ 0.082e-6■■□□□ 13.6
XRCC6P12956 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC14.89□□□□□ -0.032e-6■■□□□ 13.6
XRCC6P12956 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC14.89□□□□□ -0.032e-6■■□□□ 13.6
XRCC6P12956 AAAS-218ENST00000551724 552 ntTSL 414.76□□□□□ -0.052e-6■■□□□ 13.6
XRCC6P12956 UNC45A-214ENST00000556704 1299 ntTSL 514.75□□□□□ -0.052e-6■■□□□ 13.6
XRCC6P12956 ZNF451-206ENST00000370711 609 ntTSL 414.73□□□□□ -0.052e-6■■□□□ 13.6
XRCC6P12956 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.062e-6■■□□□ 13.6
XRCC6P12956 AAAS-214ENST00000549821 596 ntTSL 314.63□□□□□ -0.072e-6■■□□□ 13.6
XRCC6P12956 AAAS-219ENST00000552161 585 ntTSL 214.17□□□□□ -0.142e-6■■□□□ 13.6
XRCC6P12956 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.162e-6■■□□□ 13.6
XRCC6P12956 AAAS-206ENST00000547238 1154 ntTSL 213.99□□□□□ -0.172e-6■■□□□ 13.6
XRCC6P12956 CUL5-202ENST00000526303 751 ntTSL 213.95□□□□□ -0.182e-6■■□□□ 13.6
XRCC6P12956 AC010522.1-206ENST00000604231 576 ntTSL 413.54□□□□□ -0.242e-6■■□□□ 13.6
XRCC6P12956 AAAS-210ENST00000548258 550 ntTSL 513.27□□□□□ -0.292e-6■■□□□ 13.6
XRCC6P12956 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC12.87□□□□□ -0.352e-6■■□□□ 13.6
XRCC6P12956 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.382e-6■■□□□ 13.6
XRCC6P12956 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC12.4□□□□□ -0.422e-6■■□□□ 13.6
XRCC6P12956 ZNF106-208ENST00000567041 719 ntTSL 511.55□□□□□ -0.562e-6■■□□□ 13.6
XRCC6P12956 AAAS-209ENST00000547761 827 ntTSL 511.08□□□□□ -0.642e-6■■□□□ 13.6
XRCC6P12956 AAAS-208ENST00000547757 949 ntTSL 211.08□□□□□ -0.642e-6■■□□□ 13.6
XRCC6P12956 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.722e-6■■□□□ 13.6
XRCC6P12956 GABBR1-214ENST00000486434 486 ntTSL 1 (best)10.37□□□□□ -0.752e-6■■□□□ 13.6
XRCC6P12956 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.97□□□□□ -0.812e-6■■□□□ 13.6
XRCC6P12956 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.095e-6■■□□□ 13.6
XRCC6P12956 CUL5-203ENST00000531427 3596 ntTSL 1 (best)7.91□□□□□ -1.142e-6■■□□□ 13.6
XRCC6P12956 ZNF451-218ENST00000515290 581 ntTSL 44.5□□□□□ -1.692e-6■■□□□ 13.6
XRCC6P12956 ZNF451-214ENST00000509071 477 ntTSL 53.41□□□□□ -1.862e-6■■□□□ 13.6
XRCC6P12956 PKDCC-202ENST00000401498 1550 ntTSL 533.63■■■□□ 2.978e-6■■□□□ 13.6
XRCC6P12956 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.648e-6■■□□□ 13.6
XRCC6P12956 SNX5-206ENST00000469704 696 ntTSL 329.77■■■□□ 2.362e-10■■□□□ 13.6
XRCC6P12956 STRN3-207ENST00000555358 2208 ntTSL 1 (best)29.47■■■□□ 2.318e-6■■□□□ 13.6
XRCC6P12956 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.32e-10■■□□□ 13.6
XRCC6P12956 EIF4G3-206ENST00000411888 1122 ntTSL 528.88■■■□□ 2.218e-6■■□□□ 13.6
XRCC6P12956 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.17■■■□□ 2.18e-6■■□□□ 13.6
XRCC6P12956 KIFC3-209ENST00000562311 777 ntTSL 528.04■■■□□ 2.088e-6■■□□□ 13.6
XRCC6P12956 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)25.22■■□□□ 1.638e-6■■□□□ 13.6
XRCC6P12956 KIFC3-223ENST00000565684 623 ntTSL 525.2■■□□□ 1.628e-6■■□□□ 13.6
XRCC6P12956 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.47■■□□□ 1.518e-6■■□□□ 13.6
XRCC6P12956 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.358e-6■■□□□ 13.6
XRCC6P12956 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.39■■□□□ 1.338e-6■■□□□ 13.6
XRCC6P12956 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.332e-8■■□□□ 13.6
XRCC6P12956 EIF4G3-208ENST00000438975 1270 ntTSL 522.92■■□□□ 1.268e-6■■□□□ 13.6
XRCC6P12956 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.238e-6■■□□□ 13.6
XRCC6P12956 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.182e-8■■□□□ 13.6
XRCC6P12956 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.178e-6■■□□□ 13.6
XRCC6P12956 KANSL3-202ENST00000416138 552 ntTSL 421.98■■□□□ 1.118e-6■■□□□ 13.6
XRCC6P12956 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.54■■□□□ 1.048e-6■■□□□ 13.6
XRCC6P12956 VPS53-215ENST00000573028 3204 ntTSL 221.45■■□□□ 1.028e-6■■□□□ 13.6
XRCC6P12956 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.95■□□□□ 0.788e-6■■□□□ 13.6
XRCC6P12956 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.76■□□□□ 0.758e-6■■□□□ 13.6
XRCC6P12956 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.752e-10■■□□□ 13.6
XRCC6P12956 DANCR-203ENST00000441504 336 ntTSL 219.68■□□□□ 0.748e-6■■□□□ 13.6
XRCC6P12956 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.66■□□□□ 0.748e-6■■□□□ 13.6
XRCC6P12956 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.718e-6■■□□□ 13.6
XRCC6P12956 SNX5-214ENST00000490175 2025 ntTSL 1 (best)19.18■□□□□ 0.662e-10■■□□□ 13.6
XRCC6P12956 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC19.03■□□□□ 0.648e-6■■□□□ 13.6
XRCC6P12956 KANSL3-211ENST00000452268 1448 ntTSL 518.84■□□□□ 0.618e-6■■□□□ 13.6
XRCC6P12956 KANSL3-207ENST00000444759 2717 ntTSL 218.66■□□□□ 0.588e-6■■□□□ 13.6
XRCC6P12956 KIFC3-228ENST00000566975 580 ntTSL 418.61■□□□□ 0.578e-6■■□□□ 13.6
XRCC6P12956 KIFC3-208ENST00000561524 577 ntTSL 418.61■□□□□ 0.578e-6■■□□□ 13.6
XRCC6P12956 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.54■□□□□ 0.568e-6■■□□□ 13.6
XRCC6P12956 DANCR-202ENST00000425653 823 ntTSL 1 (best)18.54■□□□□ 0.568e-6■■□□□ 13.6
XRCC6P12956 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.52■□□□□ 0.568e-6■■□□□ 13.6
XRCC6P12956 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.568e-6■■□□□ 13.6
XRCC6P12956 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC18.02■□□□□ 0.478e-6■■□□□ 13.6
XRCC6P12956 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.478e-6■■□□□ 13.6
XRCC6P12956 KIFC3-216ENST00000564136 3071 ntTSL 217.95■□□□□ 0.468e-6■■□□□ 13.6
XRCC6P12956 KIFC3-210ENST00000562503 737 ntTSL 417.86■□□□□ 0.458e-6■■□□□ 13.6
XRCC6P12956 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.76■□□□□ 0.438e-6■■□□□ 13.6
XRCC6P12956 SNX5-204ENST00000431277 840 ntTSL 517.73■□□□□ 0.432e-10■■□□□ 13.6
XRCC6P12956 VPS53-218ENST00000575207 575 ntTSL 417.51■□□□□ 0.398e-6■■□□□ 13.6
XRCC6P12956 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC17.29■□□□□ 0.368e-6■■□□□ 13.6
XRCC6P12956 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.358e-6■■□□□ 13.6
XRCC6P12956 KIFC3-226ENST00000566648 651 ntTSL 317.19■□□□□ 0.348e-6■■□□□ 13.6
XRCC6P12956 ACTN4-211ENST00000589528 441 ntTSL 216.8■□□□□ 0.288e-6■■□□□ 13.6
XRCC6P12956 KIFC3-232ENST00000569112 564 ntTSL 416.69■□□□□ 0.268e-6■■□□□ 13.6
XRCC6P12956 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.65■□□□□ 0.268e-6■■□□□ 13.6
XRCC6P12956 SNX5-203ENST00000419004 778 ntTSL 516.59■□□□□ 0.252e-10■■□□□ 13.6
XRCC6P12956 GPT2-203ENST00000562132 554 ntTSL 416.55■□□□□ 0.248e-6■■□□□ 13.6
Retrieved 100 of 6,788 protein–RNA pairs in 43.1 ms